RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 LTBP3Q9NS15 1303 aa19.24■□□□□ 0.67
TSPAN4-213ENST00000524895 AKAP11Q9UKA4 1901 aa19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 ZBTB22O15209 634 aa19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 EDC3Q96F86 508 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 DBNDD1Q9H9R9 158 aa19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 AK9Q5TCS8 1911 aa19.23■□□□□ 0.67
TSPAN4-213ENST00000524895 ECE2O60344 883 aa19.22■□□□□ 0.67
TSPAN4-213ENST00000524895 RASSF7Q02833 373 aa19.22■□□□□ 0.67
TSPAN4-213ENST00000524895 TTF1Q15361 905 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-213ENST00000524895 ARHGAP27Q6ZUM4 889 aa19.22■□□□□ 0.67
TSPAN4-213ENST00000524895 FSD1Q9BTV5 496 aa19.22■□□□□ 0.67
TSPAN4-213ENST00000524895 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-213ENST00000524895 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
TSPAN4-213ENST00000524895 PODNQ7Z5L7 613 aa19.21■□□□□ 0.67
TSPAN4-213ENST00000524895 ANTXR1Q9H6X2 564 aa19.21■□□□□ 0.67
TSPAN4-213ENST00000524895 CDC45O75419 566 aa19.2■□□□□ 0.66
TSPAN4-213ENST00000524895 NIM1KQ8IY84 436 aa19.2■□□□□ 0.66
TSPAN4-213ENST00000524895 KBTBD3Q8NAB2 608 aa19.2■□□□□ 0.66
TSPAN4-213ENST00000524895 FBXW7Q969H0 707 aa19.2■□□□□ 0.66
TSPAN4-213ENST00000524895 JAG2Q9Y219 1238 aa19.2■□□□□ 0.66
TSPAN4-213ENST00000524895 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
TSPAN4-213ENST00000524895 GPR162Q16538 588 aa19.19■□□□□ 0.66
TSPAN4-213ENST00000524895 WDR66Q8TBY9 1149 aa19.19■□□□□ 0.66
TSPAN4-213ENST00000524895 PIH1D3Q9NQM4 214 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-213ENST00000524895 COL4A5P29400 1685 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 GTF2IP78347 998 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 LRRFIP1Q32MZ4 808 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 CASC1Q6TDU7 716 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 TBC1D9Q6ZT07 1266 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 ZGPATQ8N5A5 531 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 JDP2Q8WYK2 163 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 FAM205AQ6ZU69 1335 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 GOLGB1Q14789 3259 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 DOCK2Q92608 1830 aa19.18■□□□□ 0.66
TSPAN4-213ENST00000524895 IDH1O75874 414 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-213ENST00000524895 TBC1D22AQ8WUA7 517 aa19.17■□□□□ 0.66
TSPAN4-213ENST00000524895 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
TSPAN4-213ENST00000524895 LRP2BPQ9P2M1 347 aa19.17■□□□□ 0.66
TSPAN4-213ENST00000524895 SALL1Q9NSC2 1324 aa19.17■□□□□ 0.66
TSPAN4-213ENST00000524895 HIP1O00291 1037 aa19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 SPTY2D1Q68D10 685 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 ZSCAN25Q6NSZ9 544 aa19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 ZNRF3Q9ULT6 936 aa19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 MAST2Q6P0Q8 1798 aa19.16■□□□□ 0.66
TSPAN4-213ENST00000524895 USP17L3A6NCW0 530 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 USP17L4A6NCW7 530 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 LMNB1P20700 586 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 MFSD14BQ5SR56 506 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 TTLL5Q6EMB2 1281 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 USP17L1Q7RTZ2 530 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 TICAM2Q86XR7 235 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 RAI14Q9P0K7 980 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 CHD4Q14839 1912 aa19.15■□□□□ 0.66
TSPAN4-213ENST00000524895 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
TSPAN4-213ENST00000524895 ZFYP08048 801 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-213ENST00000524895 CHMLP26374 656 aa19.14■□□□□ 0.65
TSPAN4-213ENST00000524895 STRIP1Q5VSL9 837 aa19.14■□□□□ 0.65
TSPAN4-213ENST00000524895 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.65
TSPAN4-213ENST00000524895 MYH7P12883 1935 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 SCN9AQ15858 1988 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 GRIN3BO60391 1043 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 LDHBP07195 334 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 PRELPP51888 382 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 C8orf34Q49A92 452 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 DZIP1Q86YF9 867 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 KCNQ5Q9NR82 932 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 PSME4Q14997 1843 aa19.13■□□□□ 0.65
TSPAN4-213ENST00000524895 MYO5AQ9Y4I1 1855 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-213ENST00000524895 ZNF646O15015 1829 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-213ENST00000524895 PDE6AP16499 860 aa19.12■□□□□ 0.65
TSPAN4-213ENST00000524895 PRDX5P30044 214 aa19.12■□□□□ 0.65
TSPAN4-213ENST00000524895 DACT2Q5SW24 774 aa19.12■□□□□ 0.65
TSPAN4-213ENST00000524895 MAGEB6Q8N7X4 407 aa19.12■□□□□ 0.65
TSPAN4-213ENST00000524895 IGSF3O75054 1194 aa19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 RAD17O75943 681 aa19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 ADD2P35612 726 aa19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 FKBP1AP62942 108 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 CWC27Q6UX04 472 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 RUFY2Q8WXA3 655 aa19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 CCDC88AQ3V6T2 1871 aa19.11■□□□□ 0.65
TSPAN4-213ENST00000524895 ZNF532Q9HCE3 1301 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 EIF6P56537 245 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 MECOMQ03112 1051 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 UBE3CQ15386 1083 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 NAA16Q6N069 864 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 CERS5Q8N5B7 392 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 FAM227BQ96M60 508 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 MXD3Q9BW11 206 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 SUGT1Q9Y2Z0 365 aa19.1■□□□□ 0.65
TSPAN4-213ENST00000524895 TIAM2Q8IVF5 1701 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms