RNA–Protein interactions for RNA: ENST00000524845.5

PPP6R3-205, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 1 (best) BASIC

Gene PPP6R3, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-205	ENST00000524845	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	LRRC2	Q9BYS8	371 aa		13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	GZF1	Q9H116	711 aa	Predicted RBP	13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	C4B	P0C0L5	1744 aa		13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	ZNF532	Q9HCE3	1301 aa		13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	PDE6A	P16499	860 aa		13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	MCTP1	Q6DN14	999 aa		13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.12	□□□□□ -0.31	3e-7	■□□□□ 11
PPP6R3-205	ENST00000524845	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845	AKAP11	Q9UKA4	1901 aa		13.12	□□□□□ -0.31
PPP6R3-205	ENST00000524845		E7EWF7	191 aa		13.11	□□□□□ -0.31
PPP6R3-205	ENST00000524845	GYG1	P46976	350 aa		13.11	□□□□□ -0.31
PPP6R3-205	ENST00000524845	RPS8	P62241	208 aa	Known RBP	13.11	□□□□□ -0.31
PPP6R3-205	ENST00000524845	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.11	□□□□□ -0.31
PPP6R3-205	ENST00000524845	UBE3C	Q15386	1083 aa		13.11	□□□□□ -0.31
PPP6R3-205	ENST00000524845	LAMB2	P55268	1798 aa		13.11	□□□□□ -0.31
PPP6R3-205	ENST00000524845	HAND2	P61296	217 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845		Q6ZUG5	572 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	GYS1	P13807	737 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	KLRK1	P26718	216 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	EXOSC10	Q01780	885 aa	Known RBP	13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	ZSCAN25	Q6NSZ9	544 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	SMC3	Q9UQE7	1217 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	C4A	P0C0L4	1744 aa		13.1	□□□□□ -0.31
PPP6R3-205	ENST00000524845	HMGB2	P26583	209 aa	Known RBP	13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	GJB2	P29033	226 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	STK3	Q13188	491 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	UBE4A	Q14139	1066 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	ANKRD1	Q15327	319 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	SLC27A3	Q5K4L6	730 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	ZNF804B	A4D1E1	1349 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	ADRA2B	P18089	450 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	SYT1	P21579	422 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	DHX32	Q7L7V1	743 aa	Known RBP	13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	CHST3	Q7LGC8	479 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	MAGEB6	Q8N7X4	407 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	LMBRD1	Q9NUN5	540 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	TXNRD1	Q16881	649 aa		13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	FAM84B	Q96KN1	310 aa	Predicted RBP	13.09	□□□□□ -0.31
PPP6R3-205	ENST00000524845	COL24A1	Q17RW2	1714 aa		13.08	□□□□□ -0.31
PPP6R3-205	ENST00000524845	TAF1	P21675	1872 aa		13.08	□□□□□ -0.31
PPP6R3-205	ENST00000524845	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	BRF1	Q92994	677 aa		13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	STRBP	Q96SI9	672 aa	Known RBP	13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	CARMIL3	Q8ND23	1372 aa		13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	NPHP1	O15259	732 aa		13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	PRR5L	Q6MZQ0	368 aa		13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	NKX2-3	Q8TAU0	364 aa		13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	NBPF3	Q9H094	633 aa		13.08	□□□□□ -0.32
PPP6R3-205	ENST00000524845	MAP3K12	Q12852	859 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	CNBD1	Q8NA66	436 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	CTNNA3	Q9UI47	895 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	DENND2A	Q9ULE3	1009 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ARAP2	Q8WZ64	1704 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	GOLGA6L22	H0YM25	854 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	STX6	O43752	255 aa		13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	PRPF40A	O75400	957 aa	Known RBP	13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	HMGB1	P09429	215 aa	Known RBP	13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	GPHN	Q9NQX3	736 aa	Predicted RBP	13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	COL1A1	P02452	1464 aa	Predicted RBP	13.07	□□□□□ -0.32
PPP6R3-205	ENST00000524845	WDR33	Q9C0J8	1336 aa	Known RBP	13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	IMMT	Q16891	758 aa	Known RBP	13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	AGXT2	Q9BYV1	514 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	PLSCR1	O15162	318 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	FBXO33	Q7Z6M2	555 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	TXNRD3	Q86VQ6	643 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	AIDA	Q96BJ3	306 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ARMT1	Q9H993	441 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	TFCP2L1	Q9NZI6	479 aa		13.06	□□□□□ -0.32
PPP6R3-205	ENST00000524845	MBD4	O95243	580 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ZSCAN22	P10073	491 aa	Predicted RBP	13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	APOBR	Q0VD83	1088 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ADGRA1	Q86SQ6	560 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	GTF3C6	Q969F1	213 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	LRP2BP	Q9P2M1	347 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	MTMR6	Q9Y217	621 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ZNF213	O14771	459 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	PRKAB2	O43741	272 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	JAK2	O60674	1132 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	APP	P05067	770 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	SERPINB2	P05120	415 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	DDR1	Q08345	913 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	CAVIN4	Q5BKX8	364 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ABCF2	Q9UG63	623 aa		13.05	□□□□□ -0.32
PPP6R3-205	ENST00000524845	SCRN1	Q12765	414 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ZNF827	Q17R98	1081 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	TBC1D10C	Q8IV04	446 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	MIGA1	Q8NAN2	632 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	DDX49	Q9Y6V7	483 aa	Known RBP	13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ANTXR2	P58335	489 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	FGD1	P98174	961 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	VPS37D	Q86XT2	251 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	LCORL	Q8N3X6	602 aa		13.04	□□□□□ -0.32
PPP6R3-205	ENST00000524845	ZNF384	Q8TF68	577 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms