RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CDC37L1Q7L3B6 337 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 GPT2Q8TD30 523 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 SDR42E1Q8WUS8 393 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 NAPBQ9H115 298 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 B4E1Z4 1266 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 CAVIN4Q5BKX8 364 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
PTPRK-216ENST00000524481 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
PTPRK-216ENST00000524481 L1TD1Q5T7N2 865 aaKnown RBP13.89□□□□□ -0.19
PTPRK-216ENST00000524481 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 SH2B1Q9NRF2 756 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-216ENST00000524481 GJB4Q9NTQ9 266 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 GRPEL1Q9HAV7 217 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 PRC1O43663 620 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 PRDM1O75626 825 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 CAMK4Q16566 473 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 MICU3Q86XE3 530 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-216ENST00000524481 PIBF1Q8WXW3 757 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
PTPRK-216ENST00000524481 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 TRPC5Q9UL62 973 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-216ENST00000524481 SLC4A4Q9Y6R1 1079 aa13.89□□□□□ -0.19
PTPRK-216ENST00000524481 MROH5Q6ZUA9 1318 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 TM6SF1Q9BZW5 370 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 CTNNA3Q9UI47 895 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 MED23Q9ULK4 1368 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 RPS6KA4O75676 772 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 F13A1P00488 732 aa13.88□□□□□ -0.19
PTPRK-216ENST00000524481 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 SMIM22K7EJ46 135 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 UQCRFS1P1P0C7P4 283 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 ST3GAL1Q11201 340 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 NHSL1Q5SYE7 1610 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 GOLGA8BA8MQT2 603 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 SCRN1Q12765 414 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-216ENST00000524481 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 POLR3DP05423 398 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-216ENST00000524481 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-216ENST00000524481 ADD2P35612 726 aa13.87□□□□□ -0.19
PTPRK-216ENST00000524481 CMTR1Q8N1G2 835 aaKnown RBP13.87□□□□□ -0.19
PTPRK-216ENST00000524481 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
PTPRK-216ENST00000524481 GNL3LQ9NVN8 582 aaKnown RBP13.86□□□□□ -0.19
PTPRK-216ENST00000524481 NARFQ9UHQ1 456 aa13.86□□□□□ -0.19
PTPRK-216ENST00000524481 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
PTPRK-216ENST00000524481 DYNLL1P63167 89 aaKnown RBP13.86□□□□□ -0.19
PTPRK-216ENST00000524481 TRIM44Q96DX7 344 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-216ENST00000524481 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
PTPRK-216ENST00000524481 GNL2Q13823 731 aaKnown RBP13.85□□□□□ -0.19
PTPRK-216ENST00000524481 TXNRD3Q86VQ6 643 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 VGLL2Q8N8G2 317 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 DSCC1Q9BVC3 393 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 TOGARAM1Q9Y4F4 1720 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 COL14A1Q05707 1796 aaKnown RBP13.85□□□□□ -0.19
PTPRK-216ENST00000524481 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 NFIXQ14938 502 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 LCORLQ8N3X6 602 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 NCOA7Q8NI08 942 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
PTPRK-216ENST00000524481 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPRK-216ENST00000524481 ATP6V1DQ9Y5K8 247 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 C6orf229H3BNL8 230 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 APBA3O96018 575 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
PTPRK-216ENST00000524481 F8W031 263 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-216ENST00000524481 MCM5P33992 734 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPRK-216ENST00000524481 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 IFIT3O14879 490 aaKnown RBP13.84□□□□□ -0.19
PTPRK-216ENST00000524481 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
PTPRK-216ENST00000524481 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 BCL11BQ9C0K0 894 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-216ENST00000524481 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 ABCC6O95255 1503 aa13.84□□□□□ -0.19
PTPRK-216ENST00000524481 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.19
PTPRK-216ENST00000524481 RANBP6O60518 1105 aaKnown RBP13.83□□□□□ -0.19
PTPRK-216ENST00000524481 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.19
PTPRK-216ENST00000524481 PHKBQ93100 1093 aa13.83□□□□□ -0.19
PTPRK-216ENST00000524481 EPB41L2O43491 1005 aaKnown RBP13.83□□□□□ -0.2
PTPRK-216ENST00000524481 MRE11P49959 708 aa13.83□□□□□ -0.2
PTPRK-216ENST00000524481 GIMAP6Q6P9H5 292 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms