RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 CARMIL3Q8ND23 1372 aa9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 ATP5J2-PTCD1G3V325 749 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 MAP3K7O43318 606 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 HMMRO75330 724 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 USPL1Q5W0Q7 1092 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 PPP1R42Q7Z4L9 355 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 DNAJC5GQ8N7S2 189 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 SSH3Q8TE77 659 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 TFCP2L1Q9NZI6 479 aa9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 TNRC6CQ9HCJ0 1690 aaKnown RBP9.95□□□□□ -0.82
NECTIN1-204ENST00000524429 RTL9Q8NET4 1388 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 SH3TC1Q8TE82 1336 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 NTSR2O95665 410 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 GYS1P13807 737 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 APLP1P51693 650 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 MFAP1P55081 439 aaKnown RBP9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 ATP8B2P98198 1209 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 MDM2Q00987 491 aaPredicted RBP9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 UBE3BQ7Z3V4 1068 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 SIRT2Q8IXJ6 389 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 SMC5Q8IY18 1101 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 GCC1Q96CN9 775 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 NYXQ9GZU5 481 aa9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 NIP7Q9Y221 180 aaKnown RBP eCLIP9.94□□□□□ -0.82
NECTIN1-204ENST00000524429 ARAP2Q8WZ64 1704 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 PPP4CP60510 307 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 UTP14AQ9BVJ6 771 aaKnown RBP9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 PRM3Q9NNZ6 103 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 AK9Q5TCS8 1911 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 TAF1P21675 1872 aa9.93□□□□□ -0.82
NECTIN1-204ENST00000524429 GPTP24298 496 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 TM4SF1P30408 202 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 FOXO4P98177 505 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 TBC1D9BQ66K14 1250 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 NLGN1Q8N2Q7 840 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 SUCLG2Q96I99 432 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 BICC1Q9H694 974 aaKnown RBP9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 SRP68Q9UHB9 627 aaKnown RBP9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 TRMT112Q9UI30 125 aaKnown RBP9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 LRRC37AA6NMS7 1700 aa9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 COL11A2P13942 1736 aaPredicted RBP9.92□□□□□ -0.82
NECTIN1-204ENST00000524429 PNMA6EA0A0J9YXQ4 647 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 SRGAP3O43295 1099 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 PDE8AO60658 829 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 IGHDP01880 384 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 CSF1RP07333 972 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 PRELPP51888 382 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 SLC10A5Q5PT55 438 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 SUSD4Q5VX71 490 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 COL23A1Q86Y22 540 aaPredicted RBP9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 NOP58Q9Y2X3 529 aaKnown RBP9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 BRCA1P38398 1863 aaKnown RBP9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 CACNA1SQ13698 1873 aa9.91□□□□□ -0.82
NECTIN1-204ENST00000524429 NRG2O14511 850 aaPredicted RBP9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 IRS4O14654 1257 aaPredicted RBP9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 CTSWP56202 376 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 NFIXQ14938 502 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 HSP90AB4PQ58FF6 505 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 MSL1Q68DK7 614 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 FAM89AQ96GI7 184 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 COPRSQ9NQ92 184 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 TSKSQ9UJT2 592 aa9.9□□□□□ -0.82
NECTIN1-204ENST00000524429 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 TNS4Q8IZW8 715 aa9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 TTLL11Q8NHH1 800 aa9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 WWC3Q9ULE0 1092 aa9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 KIAA1551Q9HCM1 1747 aa9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 MYH13Q9UKX3 1938 aa9.89□□□□□ -0.83
NECTIN1-204ENST00000524429 ABCC12Q96J65 1359 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 RAB11FIP3O75154 756 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 RFX5P48382 616 aaPredicted RBP9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 HTRA3P83110 453 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 NUCB1Q02818 461 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 SF3B3Q15393 1217 aaKnown RBP9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 ZNF787Q6DD87 383 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 LMBR1LQ6UX01 489 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 ERC1Q8IUD2 1116 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 CNBD1Q8NA66 436 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 CALR3Q96L12 384 aaKnown RBP9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 CD2APQ9Y5K6 639 aa9.88□□□□□ -0.83
NECTIN1-204ENST00000524429 LTBP1Q14766 1721 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms