RNA–Protein interactions for RNA: ENST00000524280.5

TNIP1-219, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-219ENST00000524280 MAP3K12Q12852 859 aa18.46■□□□□ 0.55
TNIP1-219ENST00000524280 TRAPPC3LQ5T215 181 aa18.46■□□□□ 0.55
TNIP1-219ENST00000524280 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
TNIP1-219ENST00000524280 ZNF532Q9HCE3 1301 aa18.45■□□□□ 0.54
TNIP1-219ENST00000524280 ADRA2BP18089 450 aa18.45■□□□□ 0.54
TNIP1-219ENST00000524280 PDCP20941 246 aa18.45■□□□□ 0.54
TNIP1-219ENST00000524280 ZNF804BA4D1E1 1349 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 F13A1P00488 732 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 RFC4P35249 363 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 BCAMP50895 628 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 TTLL5Q6EMB2 1281 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 MINPP1Q9UNW1 487 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 LAMA4Q16363 1823 aa18.44■□□□□ 0.54
TNIP1-219ENST00000524280 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 MTMR6Q9Y217 621 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 COL4A1P02462 1669 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 DOCK2Q92608 1830 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
TNIP1-219ENST00000524280 FGD1P98174 961 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 BRF1Q92994 677 aa18.43■□□□□ 0.54
TNIP1-219ENST00000524280 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 ZNF213O14771 459 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 PFKFB2O60825 505 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 MBD3O95983 291 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 ALX1Q15699 326 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 LARP1BQ659C4 914 aaKnown RBP18.42■□□□□ 0.54
TNIP1-219ENST00000524280 TMEM87AQ8NBN3 555 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
TNIP1-219ENST00000524280 CHMP4CQ96CF2 233 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 LLPHQ9BRT6 129 aaKnown RBP18.42■□□□□ 0.54
TNIP1-219ENST00000524280 LRRC4BQ9NT99 713 aa18.42■□□□□ 0.54
TNIP1-219ENST00000524280 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
TNIP1-219ENST00000524280 ZMYM6O95789 1325 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 EVCP57679 992 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 ZNF274Q96GC6 653 aaPredicted RBP18.41■□□□□ 0.54
TNIP1-219ENST00000524280 CHAMP1Q96JM3 812 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 STRBPQ96SI9 672 aaKnown RBP18.41■□□□□ 0.54
TNIP1-219ENST00000524280 A0A1B0GUL6 1792 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 WDR19Q8NEZ3 1342 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 C4AP0C0L4 1744 aa18.41■□□□□ 0.54
TNIP1-219ENST00000524280 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
TNIP1-219ENST00000524280 MAGEB6Q8N7X4 407 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 GPT2Q8TD30 523 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 MYO5AQ9Y4I1 1855 aaKnown RBP18.4■□□□□ 0.54
TNIP1-219ENST00000524280 STK3Q13188 491 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 CAVIN4Q5BKX8 364 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 NCOA7Q8NI08 942 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 AIDAQ96BJ3 306 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 LRRC2Q9BYS8 371 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 ANKRD2Q9GZV1 360 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 CARMIL3Q8ND23 1372 aa18.4■□□□□ 0.54
TNIP1-219ENST00000524280 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
TNIP1-219ENST00000524280 ZBTB22O15209 634 aa18.39■□□□□ 0.53
TNIP1-219ENST00000524280 TM4SF1P30408 202 aa18.39■□□□□ 0.53
TNIP1-219ENST00000524280 MCM5P33992 734 aa18.39■□□□□ 0.53
TNIP1-219ENST00000524280 MRE11P49959 708 aa18.39■□□□□ 0.53
TNIP1-219ENST00000524280 KRT27Q7Z3Y8 459 aa18.39■□□□□ 0.53
TNIP1-219ENST00000524280 MB21D2Q8IYB1 491 aaPredicted RBP18.39■□□□□ 0.53
TNIP1-219ENST00000524280 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
TNIP1-219ENST00000524280 ZNF445P59923 1031 aa18.38■□□□□ 0.53
TNIP1-219ENST00000524280 HAND2P61296 217 aa18.38■□□□□ 0.53
TNIP1-219ENST00000524280 SCRN1Q12765 414 aa18.38■□□□□ 0.53
TNIP1-219ENST00000524280 SEMA3EO15041 775 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 PHF14O94880 888 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 GNAT2P19087 354 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 NCLP19338 710 aaKnown RBP18.37■□□□□ 0.53
TNIP1-219ENST00000524280 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 NFIXQ14938 502 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 FBXO33Q7Z6M2 555 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 DENND2AQ9ULE3 1009 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
TNIP1-219ENST00000524280 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
TNIP1-219ENST00000524280 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 FAM84BQ96KN1 310 aaPredicted RBP18.37■□□□□ 0.53
TNIP1-219ENST00000524280 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
TNIP1-219ENST00000524280 TAF1P21675 1872 aa18.36■□□□□ 0.53
TNIP1-219ENST00000524280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.36■□□□□ 0.53
TNIP1-219ENST00000524280 VPS37CA5D8V6 355 aaPredicted RBP18.36■□□□□ 0.53
TNIP1-219ENST00000524280 APPP05067 770 aa18.36■□□□□ 0.53
TNIP1-219ENST00000524280 PDIA3P30101 505 aaKnown RBP18.36■□□□□ 0.53
TNIP1-219ENST00000524280 GYG1P46976 350 aa18.36■□□□□ 0.53
TNIP1-219ENST00000524280 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
TNIP1-219ENST00000524280 TRDNQ13061 729 aa18.36■□□□□ 0.53
TNIP1-219ENST00000524280 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
TNIP1-219ENST00000524280 MBD4O95243 580 aa18.35■□□□□ 0.53
TNIP1-219ENST00000524280 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
TNIP1-219ENST00000524280 VPS37DQ86XT2 251 aa18.35■□□□□ 0.53
TNIP1-219ENST00000524280 NPHP1O15259 732 aa18.35■□□□□ 0.53
TNIP1-219ENST00000524280 PRC1O43663 620 aa18.35■□□□□ 0.53
TNIP1-219ENST00000524280 XRCC6P12956 609 aaKnown RBP eCLIP18.35■□□□□ 0.53
TNIP1-219ENST00000524280 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
TNIP1-219ENST00000524280 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
TNIP1-219ENST00000524280 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms