RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 TBC1D20Q96BZ9 403 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 TMEM87BQ96K49 555 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 LRRCC1Q9C099 1032 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 CRISPLD2Q9H0B8 497 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 CHMP5Q9NZZ3 219 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 SPATA7Q9P0W8 599 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 ZNF69Q9UC07 566 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 TTF2Q9UNY4 1162 aaKnown RBP7.57□□□□□ -1.2
SDC2-208ENST00000523877 PEG3Q9GZU2 1588 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 GOLGA6L10A0A0M3HER8 536 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 C19orf81C9J6K1 198 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 TCEA3O75764 348 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 FCHSD2O94868 740 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 MYCLP1P12525 358 aaPredicted RBP7.56□□□□□ -1.2
SDC2-208ENST00000523877 INPP5BP32019 993 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 PRIM1P49642 420 aaKnown RBP7.56□□□□□ -1.2
SDC2-208ENST00000523877 ZBED6P86452 979 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 MYBPC3Q14896 1274 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 CNGA3Q16281 694 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 TMEM95Q3KNT9 176 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 CCDC122Q5T0U0 273 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 CFAP58Q5T655 872 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 TTC19Q6DKK2 380 aaPredicted RBP7.56□□□□□ -1.2
SDC2-208ENST00000523877 SASS6Q6UVJ0 657 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 WDR75Q8IWA0 830 aaKnown RBP7.56□□□□□ -1.2
SDC2-208ENST00000523877 PEX5LQ8IYB4 626 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 WDR66Q8TBY9 1149 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 ARMC5Q96C12 935 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 SLC39A13Q96H72 371 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 FRMD6Q96NE9 622 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 NEK1Q96PY6 1258 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 GPCPD1Q9NPB8 672 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 TBK1Q9UHD2 729 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 DDX41Q9UJV9 622 aaKnown RBP7.56□□□□□ -1.2
SDC2-208ENST00000523877 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
SDC2-208ENST00000523877 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
SDC2-208ENST00000523877 NCKAP5LQ9HCH0 1330 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 A0A1B0GUL7 405 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 BPNT1O95861 308 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 MYL3P08590 195 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 RPS6KA3P51812 740 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 CDR1P51861 262 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 SMC1AQ14683 1233 aaKnown RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 POSTNQ15063 836 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 SLC4A8Q2Y0W8 1093 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 CCBE1Q6UXH8 406 aaPredicted RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 LEKR1Q6ZMV7 388 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 MCM10Q7L590 875 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 SNX32Q86XE0 403 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 DZIP1Q86YF9 867 aaKnown RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 MYRIPQ8NFW9 859 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 NAF1Q96HR8 494 aaKnown RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 UTP14AQ9BVJ6 771 aaKnown RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 PRKRIP1Q9H875 184 aaPredicted RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 LGR6Q9HBX8 967 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 INCENPQ9NQS7 918 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 SPATS2LQ9NUQ6 558 aaKnown RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 TYW1Q9NV66 732 aaKnown RBP7.55□□□□□ -1.2
SDC2-208ENST00000523877 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 GTF3C4Q9UKN8 822 aa7.55□□□□□ -1.2
SDC2-208ENST00000523877 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 RAPGEF3O95398 923 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 YY1P25490 414 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 CSE1LP55060 971 aaKnown RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 CBX1P83916 185 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 RABEP1Q15276 862 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 KIAA0753Q2KHM9 967 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 KBTBD12Q3ZCT8 623 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 INO80DQ53TQ3 878 aaPredicted RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 PPP1R15BQ5SWA1 713 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 PACS1Q6VY07 963 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 TAS1R3Q7RTX0 852 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 PDCL2Q8N4E4 241 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 FLCNQ8NFG4 579 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 DNAAF4Q8WXU2 420 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 KCTD12Q96CX2 325 aaKnown RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 SCLT1Q96NL6 688 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 NAP1L3Q99457 506 aaPredicted RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.54□□□□□ -1.2
SDC2-208ENST00000523877 ABCG4Q9H172 646 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 TAOK3Q9H2K8 898 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 PPCSQ9HAB8 311 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 EPB41L4AQ9HCS5 686 aaPredicted RBP7.54□□□□□ -1.2
SDC2-208ENST00000523877 ZNF304Q9HCX3 659 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 INTUQ9ULD6 942 aa7.54□□□□□ -1.2
SDC2-208ENST00000523877 SMTNL1A8MU46 457 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 PER1O15534 1290 aaPredicted RBP7.53□□□□□ -1.2
SDC2-208ENST00000523877 PRPF40AO75400 957 aaKnown RBP7.53□□□□□ -1.2
SDC2-208ENST00000523877 GYS1P13807 737 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 CTHP32929 405 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 USP8P40818 1118 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 MRE11P49959 708 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 GEMIN4P57678 1058 aaKnown RBP7.53□□□□□ -1.2
SDC2-208ENST00000523877 UBXN2AP68543 259 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 MRPL28Q13084 256 aaKnown RBP7.53□□□□□ -1.2
SDC2-208ENST00000523877 C10orf62Q5T681 223 aaPredicted RBP7.53□□□□□ -1.2
SDC2-208ENST00000523877 SFMBT2Q5VUG0 894 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms