RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ALYREFQ86V81 257 aaKnown RBP10.19□□□□□ -0.78
CPNE3-206ENST00000523469 C12orf49Q9H741 205 aa10.19□□□□□ -0.78
CPNE3-206ENST00000523469 ZFYVE1Q9HBF4 777 aa10.19□□□□□ -0.78
CPNE3-206ENST00000523469 LINC01387J3KSC0 135 aa10.18□□□□□ -0.78
CPNE3-206ENST00000523469 DAB2P98082 770 aa10.18□□□□□ -0.78
CPNE3-206ENST00000523469 FMR1NBQ8N0W7 255 aaPredicted RBP10.18□□□□□ -0.78
CPNE3-206ENST00000523469 WNT8BQ93098 351 aa10.18□□□□□ -0.78
CPNE3-206ENST00000523469 AK5Q9Y6K8 562 aa10.18□□□□□ -0.78
CPNE3-206ENST00000523469 RBM47A0AV96 593 aaKnown RBP10.17□□□□□ -0.78
CPNE3-206ENST00000523469 ZNF16P17020 682 aaPredicted RBP10.17□□□□□ -0.78
CPNE3-206ENST00000523469 EIF4BP23588 611 aaKnown RBP10.17□□□□□ -0.78
CPNE3-206ENST00000523469 COL8A1P27658 744 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 CDC25BP30305 580 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 FCGRTP55899 365 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 PSMD2Q13200 908 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 DTHD1Q6ZMT9 781 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 TMC4Q7Z404 712 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 FBXO11Q86XK2 927 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 DCAF11Q8TEB1 546 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 BCL11AQ9H165 835 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 CLEC4MQ9H2X3 399 aaPredicted RBP10.17□□□□□ -0.78
CPNE3-206ENST00000523469 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
CPNE3-206ENST00000523469 FSCN2O14926 492 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 SPATA31C1P0DKV0 1188 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 GSTT1P30711 240 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 ITGAEP38570 1179 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 IKBKEQ14164 716 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 SETDB1Q15047 1291 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 ZNF576Q9H609 170 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 FAM8A1Q9UBU6 413 aa10.16□□□□□ -0.78
CPNE3-206ENST00000523469 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
CPNE3-206ENST00000523469 DEAF1O75398 565 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-206ENST00000523469 ELNP15502 786 aa10.15□□□□□ -0.78
CPNE3-206ENST00000523469 PCDH1Q08174 1060 aa10.15□□□□□ -0.78
CPNE3-206ENST00000523469 RPS26P11Q5JNZ5 115 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-206ENST00000523469 TXNDC11Q6PKC3 985 aa10.15□□□□□ -0.78
CPNE3-206ENST00000523469 ESRRAP11474 423 aaPredicted RBP10.14□□□□□ -0.79
CPNE3-206ENST00000523469 ARL4DP49703 201 aa10.14□□□□□ -0.79
CPNE3-206ENST00000523469 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
CPNE3-206ENST00000523469 KLHL23Q8NBE8 558 aa10.14□□□□□ -0.79
CPNE3-206ENST00000523469 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
CPNE3-206ENST00000523469 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
CPNE3-206ENST00000523469 OSGEPQ9NPF4 335 aa10.14□□□□□ -0.79
CPNE3-206ENST00000523469 SEC31BQ9NQW1 1179 aa10.14□□□□□ -0.79
CPNE3-206ENST00000523469 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
CPNE3-206ENST00000523469 SORBS3O60504 671 aa10.13□□□□□ -0.79
CPNE3-206ENST00000523469 USP17L7P0C7H9 530 aa10.13□□□□□ -0.79
CPNE3-206ENST00000523469 FAM161BQ96MY7 647 aa10.13□□□□□ -0.79
CPNE3-206ENST00000523469 SOX17Q9H6I2 414 aaPredicted RBP10.13□□□□□ -0.79
CPNE3-206ENST00000523469 MRS2Q9HD23 443 aa10.13□□□□□ -0.79
CPNE3-206ENST00000523469 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-206ENST00000523469 B3GALT4O96024 378 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 C19orf57Q0VDD7 668 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 ZNF423Q2M1K9 1284 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 SLC7A3Q8WY07 619 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 CARD10Q9BWT7 1032 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 PPM1HQ9ULR3 514 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 AKAP2Q9Y2D5 859 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 ABCC9O60706 1549 aa10.12□□□□□ -0.79
CPNE3-206ENST00000523469 DLL1O00548 723 aa10.11□□□□□ -0.79
CPNE3-206ENST00000523469 GALNT11Q8NCW6 608 aa10.11□□□□□ -0.79
CPNE3-206ENST00000523469 TM4SF5O14894 197 aa10.1□□□□□ -0.79
CPNE3-206ENST00000523469 CD68P34810 354 aaPredicted RBP10.1□□□□□ -0.79
CPNE3-206ENST00000523469 RASSF7Q02833 373 aa10.1□□□□□ -0.79
CPNE3-206ENST00000523469 SUZ12Q15022 739 aaKnown RBP10.1□□□□□ -0.79
CPNE3-206ENST00000523469 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
CPNE3-206ENST00000523469 ANKRD24Q8TF21 1146 aa10.1□□□□□ -0.79
CPNE3-206ENST00000523469 KLHDC7BQ96G42 594 aa10.1□□□□□ -0.79
CPNE3-206ENST00000523469 APBA3O96018 575 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 GSK3AP49840 483 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 GRIK4Q16099 956 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 IGF2-ASQ6U949 168 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 VTI1BQ9UEU0 232 aa10.09□□□□□ -0.79
CPNE3-206ENST00000523469 FAAP100Q0VG06 881 aa10.08□□□□□ -0.8
CPNE3-206ENST00000523469 MRPL58Q14197 206 aaKnown RBP10.07□□□□□ -0.8
CPNE3-206ENST00000523469 FOXD4L6Q3SYB3 417 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-206ENST00000523469 FOXD4L3Q6VB84 417 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-206ENST00000523469 CEP44Q9C0F1 390 aa10.07□□□□□ -0.8
CPNE3-206ENST00000523469 SELPP16109 830 aa10.06□□□□□ -0.8
CPNE3-206ENST00000523469 GSTM4Q03013 218 aa10.06□□□□□ -0.8
CPNE3-206ENST00000523469 PPP2R3AQ06190 1150 aa10.06□□□□□ -0.8
CPNE3-206ENST00000523469 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
CPNE3-206ENST00000523469 CRELD1Q96HD1 420 aa10.06□□□□□ -0.8
CPNE3-206ENST00000523469 TMEM39AQ9NV64 488 aa10.06□□□□□ -0.8
CPNE3-206ENST00000523469 GPN3Q9UHW5 284 aaPredicted RBP10.06□□□□□ -0.8
CPNE3-206ENST00000523469 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
CPNE3-206ENST00000523469 C9orf172C9J069 976 aa10.05□□□□□ -0.8
CPNE3-206ENST00000523469 CTSHP09668 335 aa10.05□□□□□ -0.8
CPNE3-206ENST00000523469 SHISA2Q6UWI4 295 aa10.05□□□□□ -0.8
CPNE3-206ENST00000523469 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
CPNE3-206ENST00000523469 KCNK4Q9NYG8 393 aa10.05□□□□□ -0.8
CPNE3-206ENST00000523469 TTF2Q9UNY4 1162 aaKnown RBP10.05□□□□□ -0.8
CPNE3-206ENST00000523469 ADAM11O75078 769 aa10.04□□□□□ -0.8
CPNE3-206ENST00000523469 GDF11O95390 407 aa10.04□□□□□ -0.8
CPNE3-206ENST00000523469 ZNF157P51786 506 aaPredicted RBP10.04□□□□□ -0.8
CPNE3-206ENST00000523469 NLRP12P59046 1061 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms