RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SNED1Q8TER0 1413 aa15.03■□□□□ -0
PABPC1-219ENST00000522387 LTBP1Q14766 1721 aa15.03■□□□□ -0
PABPC1-219ENST00000522387 GNL3LQ9NVN8 582 aaKnown RBP15.03■□□□□ -0
PABPC1-219ENST00000522387 PAG1Q9NWQ8 432 aa15.03■□□□□ -0
PABPC1-219ENST00000522387 MED23Q9ULK4 1368 aa15.03■□□□□ -0
PABPC1-219ENST00000522387 ECE2O60344 883 aa15.03■□□□□ -0
PABPC1-219ENST00000522387 IDH1O75874 414 aaKnown RBP15.03■□□□□ -0
PABPC1-219ENST00000522387 SOGA3Q5TF21 947 aa15.03■□□□□ -0
PABPC1-219ENST00000522387 RTFDC1Q9BY42 306 aaPredicted RBP15.03■□□□□ -0
PABPC1-219ENST00000522387 COL1A1P02452 1464 aaPredicted RBP15.02■□□□□ -0
PABPC1-219ENST00000522387 F8W031 263 aaPredicted RBP15.02■□□□□ -0
PABPC1-219ENST00000522387 RAD17O75943 681 aa15.02■□□□□ -0
PABPC1-219ENST00000522387 ARID4AP29374 1257 aaPredicted RBP15.02■□□□□ -0
PABPC1-219ENST00000522387 PSMD1Q99460 953 aa15.02■□□□□ -0
PABPC1-219ENST00000522387 HAUS7Q99871 368 aa15.02■□□□□ -0
PABPC1-219ENST00000522387 CHD4Q14839 1912 aa15.02□□□□□ -0.01
PABPC1-219ENST00000522387 UQCRFS1P1P0C7P4 283 aa15.01□□□□□ -0.01
PABPC1-219ENST00000522387 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
PABPC1-219ENST00000522387 KIAA2012Q0VF49 1180 aa15.01□□□□□ -0.01
PABPC1-219ENST00000522387 FSD1Q9BTV5 496 aa15.01□□□□□ -0.01
PABPC1-219ENST00000522387 TTLL5Q6EMB2 1281 aa15.01□□□□□ -0.01
PABPC1-219ENST00000522387 PIH1D3Q9NQM4 214 aaKnown RBP15.01□□□□□ -0.01
PABPC1-219ENST00000522387 COL4A5P29400 1685 aa15.01□□□□□ -0.01
PABPC1-219ENST00000522387 YDJCA8MPS7 323 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 PRDX5P30044 214 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 GRIK5Q16478 980 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 BMP2KLQ5H9B9 411 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 TDRD7Q8NHU6 1098 aaKnown RBP15□□□□□ -0.01
PABPC1-219ENST00000522387 CNTROBQ8N137 903 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 COA1Q9GZY4 146 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 LRP2BPQ9P2M1 347 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 MYO5AQ9Y4I1 1855 aaKnown RBP15□□□□□ -0.01
PABPC1-219ENST00000522387 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
PABPC1-219ENST00000522387 ARAP2Q8WZ64 1704 aa14.99□□□□□ -0.01
PABPC1-219ENST00000522387 JDP2Q8WYK2 163 aa14.99□□□□□ -0.01
PABPC1-219ENST00000522387 DENND2AQ9ULE3 1009 aa14.99□□□□□ -0.01
PABPC1-219ENST00000522387 IL1R1P14778 569 aa14.99□□□□□ -0.01
PABPC1-219ENST00000522387 MFSD14BQ5SR56 506 aa14.99□□□□□ -0.01
PABPC1-219ENST00000522387 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
PABPC1-219ENST00000522387 FER1L6Q2WGJ9 1857 aa14.99□□□□□ -0.01
PABPC1-219ENST00000522387 CCDC88AQ3V6T2 1871 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
PABPC1-219ENST00000522387 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
PABPC1-219ENST00000522387 NIM1KQ8IY84 436 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 EVI5LQ96CN4 794 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 RAI14Q9P0K7 980 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 SCN9AQ15858 1988 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 AOX1Q06278 1338 aa14.98□□□□□ -0.01
PABPC1-219ENST00000522387 ARFGEF1Q9Y6D6 1849 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 SEC24BO95487 1268 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 SLC9C2Q5TAH2 1124 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 PODNQ7Z5L7 613 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 FAM227BQ96M60 508 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 SEC62Q99442 399 aaKnown RBP14.97□□□□□ -0.01
PABPC1-219ENST00000522387 MYH13Q9UKX3 1938 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 GRIPAP1Q4V328 841 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 KIAA0825Q8IV33 1275 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 ZNF512BQ96KM6 892 aaPredicted RBP14.97□□□□□ -0.01
PABPC1-219ENST00000522387 IL25Q9H293 177 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 RNF181Q9P0P0 153 aa14.97□□□□□ -0.01
PABPC1-219ENST00000522387 SCNN1DP51172 638 aa14.96□□□□□ -0.01
PABPC1-219ENST00000522387 MAGEB6Q8N7X4 407 aa14.96□□□□□ -0.01
PABPC1-219ENST00000522387 KBTBD3Q8NAB2 608 aa14.96□□□□□ -0.01
PABPC1-219ENST00000522387 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
PABPC1-219ENST00000522387 PSMD14O00487 310 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 DIXDC1Q155Q3 683 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.95□□□□□ -0.02
PABPC1-219ENST00000522387 AK9Q5TCS8 1911 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 LMNB1P20700 586 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 SLC4A3P48751 1232 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 CXCL9Q07325 125 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 MIGA1Q8NAN2 632 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 ZNRF3Q9ULT6 936 aa14.95□□□□□ -0.02
PABPC1-219ENST00000522387 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 CCDC129Q6ZRS4 1044 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 DIAPH3Q9NSV4 1193 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 A0A0D9SFI3 127 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 LDHBP07195 334 aaKnown RBP14.94□□□□□ -0.02
PABPC1-219ENST00000522387 MECOMQ03112 1051 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 TTF1Q15361 905 aaPredicted RBP14.94□□□□□ -0.02
PABPC1-219ENST00000522387 C9orf131Q5VYM1 1079 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 ADGRA1Q86SQ6 560 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 DZIP1Q86YF9 867 aaKnown RBP14.94□□□□□ -0.02
PABPC1-219ENST00000522387 WDR66Q8TBY9 1149 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 ZNF384Q8TF68 577 aa14.94□□□□□ -0.02
PABPC1-219ENST00000522387 ZNF532Q9HCE3 1301 aa14.93□□□□□ -0.02
PABPC1-219ENST00000522387 SEMA3EO15041 775 aa14.93□□□□□ -0.02
PABPC1-219ENST00000522387 CHMLP26374 656 aa14.93□□□□□ -0.02
PABPC1-219ENST00000522387 MAP3K12Q12852 859 aa14.93□□□□□ -0.02
PABPC1-219ENST00000522387 NMIQ13287 307 aaPredicted RBP14.93□□□□□ -0.02
PABPC1-219ENST00000522387 PCDHAC2Q9Y5I4 1007 aa14.93□□□□□ -0.02
PABPC1-219ENST00000522387 SHTN1A0MZ66 631 aa14.93□□□□□ -0.02
PABPC1-219ENST00000522387 PUS7LQ9H0K6 701 aaKnown RBP14.93□□□□□ -0.02
PABPC1-219ENST00000522387 TTF2Q9UNY4 1162 aaKnown RBP14.93□□□□□ -0.02
PABPC1-219ENST00000522387 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms