RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 PCSK7Q16549 785 aa7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 GTPBP3Q969Y2 492 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 TBX22Q9Y458 520 aa7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 J3QW42 95 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 PAGE1O75459 146 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 GHRHP01286 108 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 ATP11AP98196 1134 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 MLLT1Q03111 559 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 APOBRQ0VD83 1088 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 SERINC3Q13530 473 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 BMS1Q14692 1282 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 PCNX4Q63HM2 1172 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 ZNF746Q6NUN9 644 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 HFE2Q6ZVN8 426 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 UBP1Q9NZI7 540 aa7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 GPN3Q9UHW5 284 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-233ENST00000522052 NCLP19338 710 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 ETFBP38117 255 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 SDE2Q6IQ49 451 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 FAM196AQ6ZSG2 479 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 SLITRK4Q8IW52 837 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 TRIM42Q8IWZ5 723 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 NKD1Q969G9 470 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 KIFC2Q96AC6 838 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 POP1Q99575 1024 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 MUC3BQ9H195 1237 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 RBSNQ9H1K0 784 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 SENP2Q9HC62 589 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 TMEM39AQ9NV64 488 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 DACH1Q9UI36 760 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 MRVI1Q9Y6F6 885 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 ROBO2Q9HCK4 1378 aa7.44□□□□□ -1.22
CTNNA1-233ENST00000522052 CTBSQ01459 385 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 PPP2R3AQ06190 1150 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 CCDC84Q86UT8 332 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 CPLX3Q8WVH0 158 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 BSNDQ8WZ55 320 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 MKL1Q969V6 931 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 MRFAP1L1Q96HT8 127 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 UBE2OQ9C0C9 1292 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 CLEC4MQ9H2X3 399 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 IGFLR1Q9H665 355 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 PRR12Q9ULL5 1215 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 CDK11AQ9UQ88 783 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 SAMM50Q9Y512 469 aa7.43□□□□□ -1.22
CTNNA1-233ENST00000522052 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 SMNDC1O75940 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 EIF2AK2P19525 551 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 CRKP46108 304 aa7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 SYT9Q86SS6 491 aa7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 MIR1-1HGQ9H1L0 117 aa7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 SIRPGQ9P1W8 387 aa7.42□□□□□ -1.22
CTNNA1-233ENST00000522052 KLF4O43474 513 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 SIN3BO75182 1162 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 LMNB1P20700 586 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 RAB33AQ14088 237 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 CEP135Q66GS9 1140 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 NLGN1Q8N2Q7 840 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 TRIM55Q9BYV6 548 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 PRKAG3Q9UGI9 489 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 CYP8B1Q9UNU6 501 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 PCDHB5Q9Y5E4 795 aa7.41□□□□□ -1.22
CTNNA1-233ENST00000522052 B3GALT4O96024 378 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 F13A1P00488 732 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 BMP6P22004 513 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 NME2P22392 152 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 PCDH1Q08174 1060 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 LAPTM4AQ15012 233 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 SEZ6Q53EL9 994 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 RASIP1Q5U651 963 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 BNC2Q6ZN30 1099 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 ZNF662Q6ZS27 426 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 JAZF1Q86VZ6 243 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 GATAD2BQ8WXI9 593 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 TRIM47Q96LD4 638 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 SOX13Q9UN79 622 aa7.4□□□□□ -1.22
CTNNA1-233ENST00000522052 FAM221AA4D161 298 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 U2SURPO15042 1029 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 PPM1GO15355 546 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 TLR3O15455 904 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 MPP2Q14168 576 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 LRRC14Q15048 493 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 ZNF423Q2M1K9 1284 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 EGFLAMQ63HQ2 1017 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 VN1R5Q7Z5H4 357 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms