RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GJB2P29033 226 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 TTLL5Q6EMB2 1281 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 Q6ZUG5 572 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 DHX32Q7L7V1 743 aaKnown RBP21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 CELF1Q92879 486 aaKnown RBP21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 UBE4AQ14139 1066 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 WWC3Q9ULE0 1092 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 MINPP1Q9UNW1 487 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 MYH7P12883 1935 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 TCRBV5S4A2TA0A5A2 114 aa21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 APBA3O96018 575 aa21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 SYT1P21579 422 aa21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 TXNRD1Q16881 649 aa21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 IMMTQ16891 758 aaKnown RBP21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 SLC27A3Q5K4L6 730 aa21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 LMBRD1Q9NUN5 540 aa21.93■■□□□ 1.1
TRAPPC9-210ENST00000521667 STX6O43752 255 aa21.92■■□□□ 1.1
TRAPPC9-210ENST00000521667 FGAP02671 866 aa21.92■■□□□ 1.1
TRAPPC9-210ENST00000521667 MAP3K12Q12852 859 aa21.92■■□□□ 1.1
TRAPPC9-210ENST00000521667 RPS8P62241 208 aaKnown RBP21.92■■□□□ 1.1
TRAPPC9-210ENST00000521667 CARMIL3Q8ND23 1372 aa21.92■■□□□ 1.1
TRAPPC9-210ENST00000521667 CASZ1Q86V15 1759 aa21.92■■□□□ 1.1
TRAPPC9-210ENST00000521667 EXOSC10Q01780 885 aaKnown RBP21.91■■□□□ 1.1
TRAPPC9-210ENST00000521667 KLHL40Q2TBA0 621 aa21.91■■□□□ 1.1
TRAPPC9-210ENST00000521667 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
TRAPPC9-210ENST00000521667 UBR3Q6ZT12 1888 aa21.91■■□□□ 1.1
TRAPPC9-210ENST00000521667 ZNF804BA4D1E1 1349 aa21.91■■□□□ 1.1
TRAPPC9-210ENST00000521667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 FGD1P98174 961 aa21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 NFIXQ14938 502 aa21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 CCDC24Q8N4L8 307 aa21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 NPHP1O15259 732 aa21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 BRF1Q92994 677 aa21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 CHAMP1Q96JM3 812 aa21.9■■□□□ 1.1
TRAPPC9-210ENST00000521667 PRPF40AO75400 957 aaKnown RBP21.89■■□□□ 1.1
TRAPPC9-210ENST00000521667 MAGEB6Q8N7X4 407 aa21.89■■□□□ 1.1
TRAPPC9-210ENST00000521667 LRRC2Q9BYS8 371 aa21.89■■□□□ 1.1
TRAPPC9-210ENST00000521667 GNL3LQ9NVN8 582 aaKnown RBP21.89■■□□□ 1.1
TRAPPC9-210ENST00000521667 HAND2P61296 217 aa21.89■■□□□ 1.09
TRAPPC9-210ENST00000521667 STK3Q13188 491 aa21.89■■□□□ 1.09
TRAPPC9-210ENST00000521667 GTF3C6Q969F1 213 aa21.89■■□□□ 1.09
TRAPPC9-210ENST00000521667 AGXT2Q9BYV1 514 aa21.89■■□□□ 1.09
TRAPPC9-210ENST00000521667 A0A1B0GUL6 1792 aa21.89■■□□□ 1.09
TRAPPC9-210ENST00000521667 TNS1Q9HBL0 1735 aaKnown RBP21.88■■□□□ 1.09
TRAPPC9-210ENST00000521667 GYG1P46976 350 aa21.88■■□□□ 1.09
TRAPPC9-210ENST00000521667 CAVIN4Q5BKX8 364 aa21.88■■□□□ 1.09
TRAPPC9-210ENST00000521667 AIDAQ96BJ3 306 aa21.88■■□□□ 1.09
TRAPPC9-210ENST00000521667 DOCK2Q92608 1830 aa21.88■■□□□ 1.09
TRAPPC9-210ENST00000521667 ZNF213O14771 459 aa21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 PDIA4P13667 645 aaKnown RBP21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 TM4SF1P30408 202 aa21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 STRBPQ96SI9 672 aaKnown RBP21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 ANKRD2Q9GZV1 360 aa21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 TAF1P21675 1872 aa21.87■■□□□ 1.09
TRAPPC9-210ENST00000521667 WTIPA6NIX2 430 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 PLSCR1O15162 318 aa21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 DTNBO60941 627 aa21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 F13A1P00488 732 aa21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 MTMR6Q9Y217 621 aa21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 LAMA4Q16363 1823 aa21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 MYO5AQ9Y4I1 1855 aaKnown RBP21.86■■□□□ 1.09
TRAPPC9-210ENST00000521667 FBXL16Q8N461 479 aa21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 IQSEC3Q9UPP2 1182 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 APPP05067 770 aa21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 PDCP20941 246 aa21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 VPS37DQ86XT2 251 aa21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 LRP2BPQ9P2M1 347 aa21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 ATP6V1DQ9Y5K8 247 aa21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 TNRC6CQ9HCJ0 1690 aaKnown RBP21.85■■□□□ 1.09
TRAPPC9-210ENST00000521667 PFKFB2O60825 505 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 GYS1P13807 737 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 ZNF827Q17R98 1081 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 LARP1BQ659C4 914 aaKnown RBP21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 NCOA7Q8NI08 942 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 FAM84BQ96KN1 310 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 MBD4O95243 580 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 APOBRQ0VD83 1088 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 ALX1Q15699 326 aa21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 MB21D2Q8IYB1 491 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC9-210ENST00000521667 ZMYM6O95789 1325 aa21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 FSD2A1L4K1 749 aa21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 GOLGA6L3A6NEY3 463 aa21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 PATL2C9JE40 543 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 HMGB2P26583 209 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 FOXD4L6Q3SYB3 417 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 FOXD4L3Q6VB84 417 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 CHST3Q7LGC8 479 aa21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 DENND2AQ9ULE3 1009 aa21.83■■□□□ 1.09
TRAPPC9-210ENST00000521667 COL1A1P02452 1464 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 VPS37CA5D8V6 355 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 MCM5P33992 734 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 SCRN1Q12765 414 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 L1TD1Q5T7N2 865 aaKnown RBP21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 PRR5LQ6MZQ0 368 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 FBXO33Q7Z6M2 555 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 RALYLQ86SE5 291 aaKnown RBP21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 PNPLA7Q6ZV29 1317 aa21.82■■□□□ 1.08
TRAPPC9-210ENST00000521667 SEMA3EO15041 775 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms