RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 HHIPL1Q96JK4 782 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 SLC4A5Q9BY07 1137 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 PNNQ9H307 717 aaKnown RBP14.45□□□□□ -0.1
CSMD1-210ENST00000521646 SCAF8Q9UPN6 1271 aaKnown RBP14.45□□□□□ -0.1
CSMD1-210ENST00000521646 PSME4Q14997 1843 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 IRS4O14654 1257 aaPredicted RBP14.44□□□□□ -0.1
CSMD1-210ENST00000521646 LMOD3Q0VAK6 560 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 NBR1Q14596 966 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 TNIP1Q15025 636 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 C6orf132Q5T0Z8 1188 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 CDC37L1Q7L3B6 337 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 MCOLN1Q9GZU1 580 aa14.44□□□□□ -0.1
CSMD1-210ENST00000521646 CCDC85CA6NKD9 419 aa14.43□□□□□ -0.1
CSMD1-210ENST00000521646 ELL2O00472 640 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-210ENST00000521646 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-210ENST00000521646 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
CSMD1-210ENST00000521646 RBM26Q5T8P6 1007 aaKnown RBP14.43□□□□□ -0.1
CSMD1-210ENST00000521646 C8orf58Q8NAV2 365 aa14.43□□□□□ -0.1
CSMD1-210ENST00000521646 DPF2Q92785 391 aa14.43□□□□□ -0.1
CSMD1-210ENST00000521646 CCDC85AQ96PX6 553 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-210ENST00000521646 DBF4Q9UBU7 674 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-210ENST00000521646 HTTP42858 3142 aa14.43□□□□□ -0.1
CSMD1-210ENST00000521646 C6orf229H3BNL8 230 aa14.42□□□□□ -0.1
CSMD1-210ENST00000521646 HOXB7P09629 217 aa14.42□□□□□ -0.1
CSMD1-210ENST00000521646 RGS19P49795 217 aa14.42□□□□□ -0.1
CSMD1-210ENST00000521646 HUNKP57058 714 aa14.42□□□□□ -0.1
CSMD1-210ENST00000521646 TSPYL6Q8N831 410 aa14.42□□□□□ -0.1
CSMD1-210ENST00000521646 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
CSMD1-210ENST00000521646 PPP1R3GB7ZBB8 358 aa14.41□□□□□ -0.1
CSMD1-210ENST00000521646 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
CSMD1-210ENST00000521646 COL9A1P20849 921 aa14.41□□□□□ -0.1
CSMD1-210ENST00000521646 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
CSMD1-210ENST00000521646 KRT26Q7Z3Y9 468 aa14.41□□□□□ -0.1
CSMD1-210ENST00000521646 H7C1D1 291 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 KIF4BQ2VIQ3 1234 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 CCDC184Q52MB2 194 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 TMC4Q7Z404 712 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 ZBTB38Q8NAP3 1195 aaPredicted RBP14.4□□□□□ -0.1
CSMD1-210ENST00000521646 GMLQ99445 158 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 MYD88Q99836 296 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 MXD3Q9BW11 206 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 TMX4Q9H1E5 349 aaPredicted RBP14.4□□□□□ -0.1
CSMD1-210ENST00000521646 GGA3Q9NZ52 723 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 PODXL2Q9NZ53 605 aa14.4□□□□□ -0.1
CSMD1-210ENST00000521646 APAF1O14727 1248 aa14.39□□□□□ -0.11
CSMD1-210ENST00000521646 MAP3K7O43318 606 aa14.39□□□□□ -0.11
CSMD1-210ENST00000521646 IGKV5-2P06315 115 aa14.39□□□□□ -0.11
CSMD1-210ENST00000521646 MOB2Q70IA6 237 aa14.39□□□□□ -0.11
CSMD1-210ENST00000521646 GBA2Q9HCG7 927 aaPredicted RBP14.39□□□□□ -0.11
CSMD1-210ENST00000521646 HYPKQ9NX55 129 aa14.39□□□□□ -0.11
CSMD1-210ENST00000521646 UFL1O94874 794 aa14.38□□□□□ -0.11
CSMD1-210ENST00000521646 ZNF280AP59817 542 aaPredicted RBP14.38□□□□□ -0.11
CSMD1-210ENST00000521646 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
CSMD1-210ENST00000521646 RGMBQ6NW40 437 aa14.38□□□□□ -0.11
CSMD1-210ENST00000521646 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
CSMD1-210ENST00000521646 ZNF609O15014 1411 aa14.38□□□□□ -0.11
CSMD1-210ENST00000521646 MKI67P46013 3256 aaKnown RBP14.37□□□□□ -0.11
CSMD1-210ENST00000521646 PCCAP05165 728 aaPredicted RBP14.37□□□□□ -0.11
CSMD1-210ENST00000521646 KLRK1P26718 216 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 NOGQ13253 232 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 DGKZQ13574 1117 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 PRAMEF18Q5VWM3 479 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 RIC3Q7Z5B4 369 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 TXNRD3Q86VQ6 643 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 KCTD12Q96CX2 325 aaKnown RBP14.37□□□□□ -0.11
CSMD1-210ENST00000521646 CDCA5Q96FF9 252 aa14.37□□□□□ -0.11
CSMD1-210ENST00000521646 PRKRIP1Q9H875 184 aaPredicted RBP14.37□□□□□ -0.11
CSMD1-210ENST00000521646 CENPFP49454 3210 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 GOLGA8CPA6NN73 597 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 SLC10A3P09131 477 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 RPS12P25398 132 aaKnown RBP14.36□□□□□ -0.11
CSMD1-210ENST00000521646 WDR43Q15061 677 aaKnown RBP eCLIP14.36□□□□□ -0.11
CSMD1-210ENST00000521646 PROX2Q3B8N5 592 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 ANGEL2Q5VTE6 544 aaKnown RBP14.36□□□□□ -0.11
CSMD1-210ENST00000521646 G2E3Q7L622 706 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 CSRNP1Q96S65 589 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 RNF186Q9NXI6 227 aa14.36□□□□□ -0.11
CSMD1-210ENST00000521646 BRCA2P51587 3418 aa14.35□□□□□ -0.11
CSMD1-210ENST00000521646 SCARF1Q14162 830 aa14.35□□□□□ -0.11
CSMD1-210ENST00000521646 RSBN1LQ6PCB5 846 aaPredicted RBP14.35□□□□□ -0.11
CSMD1-210ENST00000521646 RASAL3Q86YV0 1011 aa14.35□□□□□ -0.11
CSMD1-210ENST00000521646 MRPL50Q8N5N7 158 aaKnown RBP14.35□□□□□ -0.11
CSMD1-210ENST00000521646 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
CSMD1-210ENST00000521646 METTL22Q9BUU2 404 aaPredicted RBP14.35□□□□□ -0.11
CSMD1-210ENST00000521646 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
CSMD1-210ENST00000521646 BHMG1C9JSJ3 638 aaPredicted RBP14.34□□□□□ -0.11
CSMD1-210ENST00000521646 CA12O43570 354 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 PDE8AO60658 829 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 TRPA1O75762 1119 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 ZNF157P51786 506 aaPredicted RBP14.34□□□□□ -0.11
CSMD1-210ENST00000521646 MLLT1Q03111 559 aaPredicted RBP14.34□□□□□ -0.11
CSMD1-210ENST00000521646 CWF19L2Q2TBE0 894 aaKnown RBP14.34□□□□□ -0.11
CSMD1-210ENST00000521646 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 DCPSQ96C86 337 aaKnown RBP14.34□□□□□ -0.11
CSMD1-210ENST00000521646 EYA3Q99504 573 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 ZC3H12CQ9C0D7 883 aaKnown RBP14.34□□□□□ -0.11
CSMD1-210ENST00000521646 GREM2Q9H772 168 aa14.34□□□□□ -0.11
CSMD1-210ENST00000521646 ANKIB1Q9P2G1 1089 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms