RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 SCN4AP35499 1836 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 A0A0C4DFX4 3053 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 GLTPD2A6NH11 291 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 CD2BP2O95400 341 aaKnown RBP5.16□□□□□ -1.58
PVT1-211ENST00000521600 BRD1O95696 1058 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 SSFA2P28290 1259 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 ATP1A2P50993 1020 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 WDR43Q15061 677 aaKnown RBP eCLIP5.16□□□□□ -1.58
PVT1-211ENST00000521600 INTS6LQ5JSJ4 861 aaKnown RBP5.16□□□□□ -1.58
PVT1-211ENST00000521600 CC2D1BQ5T0F9 858 aaKnown RBP5.16□□□□□ -1.58
PVT1-211ENST00000521600 RC3H1Q5TC82 1133 aaKnown RBP5.16□□□□□ -1.58
PVT1-211ENST00000521600 TRIM50Q86XT4 487 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 ANKMY2Q8IV38 441 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 NGEFQ8N5V2 710 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 FAM200AQ8TCP9 573 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 AIDAQ96BJ3 306 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 DNAAF2Q9NVR5 837 aaKnown RBP5.16□□□□□ -1.58
PVT1-211ENST00000521600 TLL2Q9Y6L7 1015 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 TTC21AQ8NDW8 1320 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 USP31Q70CQ4 1352 aa5.16□□□□□ -1.58
PVT1-211ENST00000521600 ANKRD31Q8N7Z5 1873 aa5.15□□□□□ -1.58
PVT1-211ENST00000521600 ZNF831Q5JPB2 1677 aa5.15□□□□□ -1.58
PVT1-211ENST00000521600 COL6A3P12111 3177 aa5.15□□□□□ -1.58
PVT1-211ENST00000521600 CD163L1Q9NR16 1453 aa5.15□□□□□ -1.58
PVT1-211ENST00000521600 NRXN2Q9P2S2 1712 aa5.15□□□□□ -1.58
PVT1-211ENST00000521600 FSHRP23945 695 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 GTF2IP78347 998 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 DPYDQ12882 1025 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 USP4Q13107 963 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 MMRN1Q13201 1228 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 ZCRB1Q8TBF4 217 aaKnown RBP5.15□□□□□ -1.59
PVT1-211ENST00000521600 EMID1Q96A84 441 aaPredicted RBP5.15□□□□□ -1.59
PVT1-211ENST00000521600 LTV1Q96GA3 475 aaPredicted RBP5.15□□□□□ -1.59
PVT1-211ENST00000521600 KIAA1024Q9UPX6 916 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 MAP4K5Q9Y4K4 846 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 BRCA2P51587 3418 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 PASKQ96RG2 1323 aa5.15□□□□□ -1.59
PVT1-211ENST00000521600 COL11A2P13942 1736 aaPredicted RBP5.14□□□□□ -1.59
PVT1-211ENST00000521600 CENPFP49454 3210 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 ERVH48-1M5A8F1 160 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 ZBTB7BO15156 539 aaPredicted RBP5.14□□□□□ -1.59
PVT1-211ENST00000521600 PPP2R1AP30153 589 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 CHRNA5P30532 468 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 KCNA1Q09470 495 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 ITPK1Q13572 414 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 MPRIPQ6WCQ1 1025 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 NME9Q86XW9 330 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 LARGE2Q8N3Y3 721 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 GZF1Q9H116 711 aaPredicted RBP5.14□□□□□ -1.59
PVT1-211ENST00000521600 PIM2Q9P1W9 311 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 EVC2Q86UK5 1308 aa5.14□□□□□ -1.59
PVT1-211ENST00000521600 SLC19A1P41440 591 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 SCTRP47872 440 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 IRX6P78412 446 aaPredicted RBP5.13□□□□□ -1.59
PVT1-211ENST00000521600 DALRD3Q5D0E6 543 aaKnown RBP5.13□□□□□ -1.59
PVT1-211ENST00000521600 CCDC102BQ68D86 513 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 TPCN2Q8NHX9 752 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 TMPRSS4Q9NRS4 437 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 CCDC87Q9NVE4 849 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 RCAN3Q9UKA8 241 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 RBM19Q9Y4C8 960 aaKnown RBP5.13□□□□□ -1.59
PVT1-211ENST00000521600 PCDHGA11Q9Y5H2 935 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 ARFGEF2Q9Y6D5 1785 aa5.13□□□□□ -1.59
PVT1-211ENST00000521600 TJP1Q07157 1748 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 SLX4Q8IY92 1834 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 LOC102724428A0A0B4J2F2 783 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 PATL2C9JE40 543 aaKnown RBP5.12□□□□□ -1.59
PVT1-211ENST00000521600 NFKBIEO00221 500 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 DKK1O94907 266 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 MYCP01106 439 aaPredicted RBP5.12□□□□□ -1.59
PVT1-211ENST00000521600 GYS1P13807 737 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 LMNB1P20700 586 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 RRP1P56182 461 aaKnown RBP5.12□□□□□ -1.59
PVT1-211ENST00000521600 SIK1P57059 783 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 DDR1Q08345 913 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 B4GALNT3Q6L9W6 998 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.12□□□□□ -1.598e-7■■■□□ 17.1
PVT1-211ENST00000521600 SIX5Q8N196 739 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 USHBP1Q8N6Y0 703 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 PIGBQ92521 554 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 IP6K1Q92551 441 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 CCDC136Q96JN2 1154 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 CDK15Q96Q40 435 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 MCOLN1Q9GZU1 580 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 CYLDQ9NQC7 956 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 IVNS1ABPQ9Y6Y0 642 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 CGNL1Q0VF96 1302 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 KDRP35968 1356 aa5.12□□□□□ -1.59
PVT1-211ENST00000521600 SCN11AQ9UI33 1791 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 RASSF10A6NK89 507 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 SFI1A8K8P3 1242 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 WNT7AO00755 349 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 CYP27B1O15528 508 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 SIAH2O43255 324 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 LGR5O75473 907 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 FBLN1P23142 703 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 GRM5P41594 1212 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 SEC13P55735 322 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 SPRYD7Q5W111 196 aa5.11□□□□□ -1.59
PVT1-211ENST00000521600 CC2D2BQ6DHV5 1058 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms