RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	PRM3	Q9NNZ6	103 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	HCST	Q9UBK5	93 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	DBF4	Q9UBU7	674 aa	Predicted RBP	6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	TNRC6C	Q9HCJ0	1690 aa	Known RBP	6.84	□□□□□ -1.32
CDH17-205	ENST00000521491	ABCC4	O15439	1325 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	PTPRC	P08575	1304 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491		F6X3S4	739 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	IPO8	O15397	1037 aa	Known RBP	6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	ZPR1	O75312	459 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	A1BG	P04217	495 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	CYP19A1	P11511	503 aa	Predicted RBP	6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	CTDSPL2	Q05D32	466 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	AIMP1	Q12904	312 aa	Known RBP	6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	FKBP5	Q13451	457 aa	Predicted RBP	6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	NFIX	Q14938	502 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	MSS51	Q4VC12	460 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	SPNS2	Q8IVW8	549 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	DZIP1L	Q8IYY4	767 aa	Known RBP	6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	TMEM57	Q8N5G2	664 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	SPSB2	Q99619	263 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	IL21	Q9HBE4	155 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	COG6	Q9Y2V7	657 aa		6.83	□□□□□ -1.32
CDH17-205	ENST00000521491	CCDC88A	Q3V6T2	1871 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491		A6NJR5	290 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	PDE3A	Q14432	1141 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	NBPF10	Q6P3W6	841 aa	Known RBP	6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	SLC4A10	Q6U841	1118 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	ITPRIP	Q8IWB1	547 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	NBPF15	Q8N660	670 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	SMC1B	Q8NDV3	1235 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	UBE2Q2	Q8WVN8	375 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	ARHGAP45	Q92619	1136 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	CHMP4A	Q9BY43	222 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	API5	Q9BZZ5	524 aa	Known RBP	6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	HYPK	Q9NX55	129 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	ZBTB1	Q9Y2K1	713 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	ZNF330	Q9Y3S2	320 aa	Predicted RBP	6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	DLEC1	Q9Y238	1755 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	CARMIL3	Q8ND23	1372 aa		6.82	□□□□□ -1.32
CDH17-205	ENST00000521491	NRXN2	Q9P2S2	1712 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	ERBB4	Q15303	1308 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	GLTPD2	A6NH11	291 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	POTEC	B2RU33	542 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	NFKBIE	O00221	500 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	STARD3NL	O95772	234 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	ADH1B	P00325	375 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	SERPINB2	P05120	415 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	JUND	P17535	347 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	LMNB1	P20700	586 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	MVP	Q14764	893 aa	Known RBP	6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	TJAP1	Q5JTD0	557 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	LRP10	Q7Z4F1	713 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	TNS4	Q8IZW8	715 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	XAGE3	Q8WTP9	111 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	NARF	Q9UHQ1	456 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	TIAM2	Q8IVF5	1701 aa		6.81	□□□□□ -1.32
CDH17-205	ENST00000521491	PI4KAP2	A4QPH2	592 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	HSPA1A	P0DMV8	641 aa	Known RBP	6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	HSPA1B	P0DMV9	641 aa	Known RBP	6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	VEGFA	P15692	232 aa	Predicted RBP	6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	LYPD8	Q6UX82	237 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	BICDL1	Q6ZP65	573 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	TTLL7	Q6ZT98	887 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	COPS6	Q7L5N1	327 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	C2CD5	Q86YS7	1000 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	CCDC24	Q8N4L8	307 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	TTLL6	Q8N841	843 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	PI4KAP1	Q8N8J0	262 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	MAP3K2	Q9Y2U5	619 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	NDUFB9	Q9Y6M9	179 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	COL15A1	P39059	1388 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	LAMB2	P55268	1798 aa		6.8	□□□□□ -1.32
CDH17-205	ENST00000521491	ANKRD31	Q8N7Z5	1873 aa		6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	TLL1	O43897	1013 aa		6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	DDX58	O95786	925 aa	Known RBP	6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	PTPRN	Q16849	979 aa		6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	INTS3	Q68E01	1043 aa	Known RBP	6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	LRRN4	Q8WUT4	740 aa		6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	DNAAF4	Q8WXU2	420 aa		6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	MYH3	P11055	1940 aa		6.79	□□□□□ -1.32
CDH17-205	ENST00000521491	COL11A2	P13942	1736 aa	Predicted RBP	6.79	□□□□□ -1.32
CDH17-205	ENST00000521491		H0YIN7	160 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	C21orf2	O43822	256 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	DXO	O77932	396 aa	Known RBP	6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	IL6ST	P40189	918 aa	Predicted RBP	6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	CCT4	P50991	539 aa	Known RBP	6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	MMP16	P51512	607 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	CWF19L2	Q2TBE0	894 aa	Known RBP	6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	TBC1D9B	Q66K14	1250 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	B4GALNT3	Q6L9W6	998 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	KSR2	Q6VAB6	950 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	KIF6	Q6ZMV9	814 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	FAM160A2	Q8N612	972 aa	Predicted RBP	6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	PNMA1	Q8ND90	353 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	POM121	Q96HA1	1249 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	MYD88	Q99836	296 aa		6.78	□□□□□ -1.32
CDH17-205	ENST00000521491	C1orf115	Q9H7X2	142 aa		6.78	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms