RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 TSPYL4Q9UJ04 414 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 BCL9LQ86UU0 1499 aa10.08□□□□□ -0.8
CTHRC1-203ENST00000520337 SPATA31A1Q5TZJ5 1347 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 MRC1P22897 1456 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 A0A1W2PRU2 124 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 ELL2O00472 640 aaPredicted RBP10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 TWISTNBQ3B726 338 aaPredicted RBP10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 ALDH1L2Q3SY69 923 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 FNBP4Q8N3X1 1017 aaPredicted RBP10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 BCL2L13Q9BXK5 485 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 USP35Q9P2H5 1018 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
CTHRC1-203ENST00000520337 KCNQ3O43525 872 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 SCTRP47872 440 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 GSK3AP49840 483 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 CLN3Q13286 438 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 SV2AQ7L0J3 742 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 UNC5CLQ8IV45 518 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 NLRP3Q96P20 1036 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
CTHRC1-203ENST00000520337 MEN1O00255 615 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 HSP90AB1P08238 724 aaKnown RBP10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 TEFQ10587 303 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 IRF5Q13568 498 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 THRAP3Q9Y2W1 955 aaKnown RBP10.05□□□□□ -0.8
CTHRC1-203ENST00000520337 HEG1Q9ULI3 1381 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 GNRH1P01148 92 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 EIF4A1P60842 406 aaKnown RBP10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 VPS72Q15906 364 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 WASHC4Q2M389 1173 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 NFATC2IPQ8NCF5 419 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 EXOC6Q8TAG9 804 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 SMC4Q9NTJ3 1288 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 TNNQ9UQP3 1299 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 PAPPAQ13219 1627 aa10.04□□□□□ -0.8
CTHRC1-203ENST00000520337 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 PRICKLE2Q7Z3G6 844 aa10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 VWA5B2Q8N398 1253 aa10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 DDX54Q8TDD1 881 aaKnown RBP10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 FRAT1Q92837 279 aaPredicted RBP10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 PPP4R2Q9NY27 417 aa10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 NOB1Q9ULX3 412 aaKnown RBP10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 SOS1Q07889 1333 aaPredicted RBP10.03□□□□□ -0.8
CTHRC1-203ENST00000520337 C5P01031 1676 aa10.02□□□□□ -0.8
CTHRC1-203ENST00000520337 CDC14CA4D256 554 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 TCERG1O14776 1098 aaKnown RBP10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 RLBP1P12271 317 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 KRT76Q01546 638 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 MCM6Q14566 821 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 ZKSCAN2Q63HK3 967 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 PANK1Q8TE04 598 aa10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
CTHRC1-203ENST00000520337 TNS2Q63HR2 1409 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 EXOC5O00471 708 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 TRIM27P14373 513 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 CABP4P57796 275 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 KCNMA1Q12791 1236 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 SLC39A6Q13433 755 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 SLFNL1Q499Z3 407 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 WDR44Q5JSH3 913 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 ZNF790Q6PG37 636 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 ARHGAP45Q92619 1136 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 CNTNAP3Q9BZ76 1288 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 GDPD2Q9HCC8 539 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 ARHGEF10LQ9HCE6 1279 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 USP21Q9UK80 565 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 KIF16BQ96L93 1317 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 GLI3P10071 1580 aa10.01□□□□□ -0.81
CTHRC1-203ENST00000520337 THSD7AQ9UPZ6 1657 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 DOT1LQ8TEK3 1739 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 IPO8O15397 1037 aaKnown RBP10□□□□□ -0.81
CTHRC1-203ENST00000520337 HOXB7P09629 217 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
CTHRC1-203ENST00000520337 SOX11P35716 441 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 ATF7IPQ6VMQ6 1270 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 PHTF2Q8N3S3 785 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 DYRK1BQ9Y463 629 aa10□□□□□ -0.81
CTHRC1-203ENST00000520337 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms