RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 MAP2K5Q13163 448 aa8.54□□□□□ -1.04
CTNNA1-217ENST00000519634 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-217ENST00000519634 NECTIN2Q92692 538 aa8.54□□□□□ -1.04
CTNNA1-217ENST00000519634 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-217ENST00000519634 NSFL1CQ9UNZ2 370 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-217ENST00000519634 SH3TC1Q8TE82 1336 aa8.54□□□□□ -1.04
CTNNA1-217ENST00000519634 RTL9Q8NET4 1388 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 FECHP22830 423 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 ZNF280AP59817 542 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 CNGB1Q14028 1251 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 SCARF1Q14162 830 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 ANGEL2Q5VTE6 544 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 NLRP10Q86W26 655 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 CFHR5Q9BXR6 569 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 POLLQ9UGP5 575 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 ASTN2O75129 1339 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
CTNNA1-217ENST00000519634 TK2O00142 265 aa8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 NEFMP07197 916 aa8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 LSM11P83369 360 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 LRP10Q7Z4F1 713 aa8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 KRI1Q8N9T8 703 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 AGBL3Q8NEM8 1001 aa8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
CTNNA1-217ENST00000519634 UBE2Q2LH0YL09 131 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 IRF6O14896 467 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 GPSM2P81274 684 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 TCIRG1Q13488 830 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 RSBN1LQ6PCB5 846 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 MOB2Q70IA6 237 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 VPS9D1Q9Y2B5 631 aa8.51□□□□□ -1.05
CTNNA1-217ENST00000519634 ZNF609O15014 1411 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 EIF2S2P20042 333 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 NF2P35240 595 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 SF3B3Q15393 1217 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 PROX2Q3B8N5 592 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 COPS6Q7L5N1 327 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 TBC1D16Q8TBP0 767 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 CELF1Q92879 486 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 MYOZ2Q9NPC6 264 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 TRIM17Q9Y577 477 aa8.5□□□□□ -1.05
CTNNA1-217ENST00000519634 DUOX1Q9NRD9 1551 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 PROSER3Q2NL68 480 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 OTOP1Q7RTM1 612 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 ARMC9Q7Z3E5 817 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 XAGE3Q8WTP9 111 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 R3HDMLQ9H3Y0 253 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 PODXL2Q9NZ53 605 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 TSPYL4Q9UJ04 414 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
CTNNA1-217ENST00000519634 UFL1O94874 794 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 ANXA1P04083 346 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 OATP04181 439 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 INHBEP58166 350 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 NFE2L2Q16236 605 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 ARMC5Q96C12 935 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 GMLQ99445 158 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 ANKIB1Q9P2G1 1089 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 PAPPA2Q9BXP8 1791 aa8.48□□□□□ -1.05
CTNNA1-217ENST00000519634 MKI67P46013 3256 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 MANSC4A6NHS7 340 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 EN2P19622 333 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 PPP2R1AP30153 589 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 PRAMEF18Q5VWM3 479 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 PODNQ7Z5L7 613 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 ERO1AQ96HE7 468 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 BABAM1Q9NWV8 329 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 PTPN22Q9Y2R2 807 aa8.47□□□□□ -1.05
CTNNA1-217ENST00000519634 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-217ENST00000519634 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-217ENST00000519634 MMP14P50281 582 aa8.46□□□□□ -1.06
CTNNA1-217ENST00000519634 LDLRAD1Q5T700 205 aa8.46□□□□□ -1.06
CTNNA1-217ENST00000519634 OGFOD1Q8N543 542 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms