RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 DLGAP5Q15398 846 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 CERS5Q8N5B7 392 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
CTNNA1-215ENST00000519309 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 DDX58O95786 925 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 IGKV5-2P06315 115 aa10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 FKBP1AP62942 108 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 GTF2IP78347 998 aa10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 C15orf52Q6ZUT6 534 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 JARID2Q92833 1246 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 ANKRD2Q9GZV1 360 aa10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 CACNA1FO60840 1977 aa10.84□□□□□ -0.67
CTNNA1-215ENST00000519309 MYO1BO43795 1136 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 NBPF12Q5TAG4 269 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 CHRDL2Q6WN34 429 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 RUNDC1Q96C34 613 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 OPTNQ96CV9 577 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 PLA2G12BQ9BX93 195 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 CD209Q9NNX6 404 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 ZCCHC17Q9NP64 241 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 MGAMO43451 1857 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 AOX1Q06278 1338 aa10.83□□□□□ -0.68
CTNNA1-215ENST00000519309 GNRH1P01148 92 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 IGHMBP2P38935 993 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 TNFAIP1Q13829 316 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 TAF1CQ15572 869 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 CFAP100Q494V2 611 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 UBE2Q1Q7Z7E8 422 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 POTEDQ86YR6 584 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 CCDC146Q8IYE0 955 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 ZFYVE28Q9HCC9 887 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 IFT57Q9NWB7 429 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 MAP3K2Q9Y2U5 619 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 ALPK3Q96L96 1907 aa10.82□□□□□ -0.68
CTNNA1-215ENST00000519309 CCL15-CCL14A0A0B4J2E2 113 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 A0A1W2PPC1 479 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 CLRN2A0PK11 232 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 IL1R1P14778 569 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 GTF2A2P52657 109 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 PRMT2P55345 433 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 RASA3Q14644 834 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 RALBP1Q15311 655 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 CCL15Q16663 113 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 TEPSINQ96N21 525 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 ELP3Q9H9T3 547 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 VEZTQ9HBM0 779 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
CTNNA1-215ENST00000519309 NEURL1BA8MQ27 555 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 TLR2O60603 784 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 ITGA6P23229 1130 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 CASP7P55210 303 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 LACTBP83111 547 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 CHRNDQ07001 517 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 KSR2Q6VAB6 950 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 PPP4R3CPQ6ZMV5 832 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 FAM43AQ8N2R8 423 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 SH3TC2Q8TF17 1288 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 CHMP4AQ9BY43 222 aa10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 MYBBP1AQ9BQG0 1328 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-215ENST00000519309 PI4KAP2A4QPH2 592 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 H7C1W4 665 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 DLL1O00548 723 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 CSF1RP07333 972 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 KCNJ4P48050 445 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 GNAI1P63096 354 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 NEXNQ0ZGT2 675 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 VGLL4Q14135 290 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 CCDC30Q5VVM6 783 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 ZNF804AQ7Z570 1209 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 PI4KAP1Q8N8J0 262 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 MPHOSPH8Q99549 860 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 FAM205AQ6ZU69 1335 aa10.79□□□□□ -0.68
CTNNA1-215ENST00000519309 RPAP1Q9BWH6 1393 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 CALD1Q05682 793 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 CWF19L2Q2TBE0 894 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 CDAN1Q8IWY9 1227 aa10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 NKX2-3Q8TAU0 364 aa10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 SERPINA10Q9UK55 444 aa10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 ADGRA2Q96PE1 1338 aa10.78□□□□□ -0.68
CTNNA1-215ENST00000519309 F8W031 263 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms