RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 TM4SF5O14894 197 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
SKP1-205ENST00000519054 PIP4K2BP78356 416 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 FMR1Q06787 632 aaKnown RBP eCLIP6.8□□□□□ -1.32
SKP1-205ENST00000519054 IKBKEQ14164 716 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 TXNRD3Q86VQ6 643 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 KLHL23Q8NBE8 558 aa6.8□□□□□ -1.32
SKP1-205ENST00000519054 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
SKP1-205ENST00000519054 SOX1O00570 391 aaPredicted RBP6.79□□□□□ -1.32
SKP1-205ENST00000519054 ADAM11O75078 769 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 ALX3O95076 343 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 WISP1O95388 367 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 IREB2P48200 963 aaKnown RBP6.79□□□□□ -1.32
SKP1-205ENST00000519054 NLRP12P59046 1061 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 DOC2BQ14184 412 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 GRM2Q14416 872 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 SUZ12Q15022 739 aaKnown RBP6.79□□□□□ -1.32
SKP1-205ENST00000519054 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 WNT8BQ93098 351 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 SETDB2Q96T68 719 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 NLRP2Q9NX02 1062 aa6.79□□□□□ -1.32
SKP1-205ENST00000519054 P4HBP07237 508 aaKnown RBP6.78□□□□□ -1.32
SKP1-205ENST00000519054 ESRRAP11474 423 aaPredicted RBP6.78□□□□□ -1.32
SKP1-205ENST00000519054 NOS3P29474 1203 aa6.78□□□□□ -1.32
SKP1-205ENST00000519054 ARL4DP49703 201 aa6.78□□□□□ -1.32
SKP1-205ENST00000519054 C19orf57Q0VDD7 668 aa6.78□□□□□ -1.32
SKP1-205ENST00000519054 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
SKP1-205ENST00000519054 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
SKP1-205ENST00000519054 UBASH3BQ8TF42 649 aa6.78□□□□□ -1.32
SKP1-205ENST00000519054 FOXD4L4Q8WXT5 416 aaPredicted RBP6.78□□□□□ -1.32
SKP1-205ENST00000519054 AKTIPQ9H8T0 292 aa6.78□□□□□ -1.32
SKP1-205ENST00000519054 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
SKP1-205ENST00000519054 ANKRD33BA6NCL7 494 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 F8W735 103 aaPredicted RBP6.77□□□□□ -1.33
SKP1-205ENST00000519054 PCDH1Q08174 1060 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 DUOXA2Q1HG44 320 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
SKP1-205ENST00000519054 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 GLIS3Q8NEA6 775 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 CLEC4MQ9H2X3 399 aaPredicted RBP6.77□□□□□ -1.33
SKP1-205ENST00000519054 ABCB6Q9NP58 842 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 TPSG1Q9NRR2 321 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 TRAK1Q9UPV9 953 aa6.77□□□□□ -1.33
SKP1-205ENST00000519054 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 FURINP09958 794 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 ATP2B2Q01814 1243 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 ZNF423Q2M1K9 1284 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
SKP1-205ENST00000519054 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 ZNF576Q9H609 170 aa6.76□□□□□ -1.33
SKP1-205ENST00000519054 LDHBP07195 334 aaKnown RBP6.75□□□□□ -1.33
SKP1-205ENST00000519054 ITPKAP23677 461 aa6.75□□□□□ -1.33
SKP1-205ENST00000519054 FCGRTP55899 365 aa6.75□□□□□ -1.33
SKP1-205ENST00000519054 GSTM4Q03013 218 aa6.75□□□□□ -1.33
SKP1-205ENST00000519054 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
SKP1-205ENST00000519054 MEGF10Q96KG7 1140 aa6.75□□□□□ -1.33
SKP1-205ENST00000519054 USP26Q9BXU7 913 aa6.75□□□□□ -1.33
SKP1-205ENST00000519054 GLB1P16278 677 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 CCDC27Q2M243 656 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 ALG1LQ6GMV1 187 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 DNAJC14Q6Y2X3 702 aaPredicted RBP6.74□□□□□ -1.33
SKP1-205ENST00000519054 DTHD1Q6ZMT9 781 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 FBF1Q8TES7 1133 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 TP53INP1Q96A56 240 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
SKP1-205ENST00000519054 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
SKP1-205ENST00000519054 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
SKP1-205ENST00000519054 ZBTB7CA1YPR0 619 aa6.72□□□□□ -1.33
SKP1-205ENST00000519054 B3GALT4O96024 378 aa6.72□□□□□ -1.33
SKP1-205ENST00000519054 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
SKP1-205ENST00000519054 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
SKP1-205ENST00000519054 RUSC1Q9BVN2 902 aa6.72□□□□□ -1.33
SKP1-205ENST00000519054 OSBPL7Q9BZF2 842 aa6.72□□□□□ -1.33
SKP1-205ENST00000519054 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
SKP1-205ENST00000519054 LOC100289279A0A1B0GTE1 492 aa6.71□□□□□ -1.34
SKP1-205ENST00000519054 FAAP100Q0VG06 881 aa6.71□□□□□ -1.34
SKP1-205ENST00000519054 RSPO4Q2I0M5 234 aaPredicted RBP6.71□□□□□ -1.34
SKP1-205ENST00000519054 EAPPQ56P03 285 aaPredicted RBP6.71□□□□□ -1.34
SKP1-205ENST00000519054 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.34
SKP1-205ENST00000519054 Q6ZS46 218 aa6.71□□□□□ -1.34
SKP1-205ENST00000519054 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
SKP1-205ENST00000519054 DZIP1LQ8IYY4 767 aaKnown RBP6.71□□□□□ -1.34
SKP1-205ENST00000519054 SPG7Q9UQ90 795 aa6.71□□□□□ -1.34
SKP1-205ENST00000519054 K7ELQ4 463 aaPredicted RBP6.7□□□□□ -1.34
SKP1-205ENST00000519054 DLGAP3O95886 979 aa6.7□□□□□ -1.34
SKP1-205ENST00000519054 MAOBP27338 520 aa6.7□□□□□ -1.34
SKP1-205ENST00000519054 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
SKP1-205ENST00000519054 DDX54Q8TDD1 881 aaKnown RBP6.7□□□□□ -1.34
SKP1-205ENST00000519054 UBL7Q96S82 380 aaPredicted RBP6.7□□□□□ -1.34
SKP1-205ENST00000519054 TRIM56Q9BRZ2 755 aaKnown RBP6.7□□□□□ -1.34
SKP1-205ENST00000519054 CEP41Q9BYV8 373 aa6.7□□□□□ -1.34
SKP1-205ENST00000519054 NRSN2Q9GZP1 204 aa6.7□□□□□ -1.34
SKP1-205ENST00000519054 RNF208Q9H0X6 261 aa6.7□□□□□ -1.34
SKP1-205ENST00000519054 GPN3Q9UHW5 284 aaPredicted RBP6.7□□□□□ -1.34
SKP1-205ENST00000519054 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms