RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 C16orf46Q6P387 395 aa6.53□□□□□ -1.36
ATP6V1C1-204ENST00000518959 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
ATP6V1C1-204ENST00000518959 GPR152Q8TDT2 470 aa6.53□□□□□ -1.36
ATP6V1C1-204ENST00000518959 ARXQ96QS3 562 aa6.53□□□□□ -1.36
ATP6V1C1-204ENST00000518959 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
ATP6V1C1-204ENST00000518959 FAM170BA6NMN3 283 aa6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 LMOD1P29536 600 aaPredicted RBP6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ADMP35318 185 aa6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ZAR1Q86SH2 424 aa6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SMG8Q8ND04 991 aaKnown RBP6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 PPP1R12CQ9BZL4 782 aa6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SAP130Q9H0E3 1048 aa6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 KANSL3Q9P2N6 904 aa6.52□□□□□ -1.37
ATP6V1C1-204ENST00000518959 DRD2P14416 443 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ZAP70P43403 619 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 FLIIQ13045 1269 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 PRIMPOLQ96LW4 560 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
ATP6V1C1-204ENST00000518959 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
ATP6V1C1-204ENST00000518959 TIAF1O95411 115 aa6.5□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SLC38A3Q99624 504 aa6.5□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SUGCTQ9HAC7 445 aa6.5□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ZC3H7BQ9UGR2 993 aaKnown RBP6.5□□□□□ -1.37
ATP6V1C1-204ENST00000518959 CYP27A1Q02318 531 aa6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 IKBKEQ14164 716 aa6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 TMEM132AQ24JP5 1023 aa6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ZNF792Q3KQV3 632 aa6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 HGSNATQ68CP4 663 aa6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ELP3Q9H9T3 547 aa6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
ATP6V1C1-204ENST00000518959 PRMT3O60678 531 aa6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 FAM26DQ5JW98 314 aa6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ZNF438Q7Z4V0 828 aa6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 CCER1Q8TC90 406 aaPredicted RBP6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 FAM168AQ92567 244 aa6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 CALR3Q96L12 384 aaKnown RBP6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 CARMIL2Q6F5E8 1435 aa6.48□□□□□ -1.37
ATP6V1C1-204ENST00000518959 LOC100289279A0A1B0GTE1 492 aa6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ACPPP15309 386 aa6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 CES1P23141 567 aa6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 EXOSC6Q5RKV6 272 aaKnown RBP6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 ZNF574Q6ZN55 896 aaPredicted RBP6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 STK11IPQ8N1F8 1099 aa6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SOX13Q9UN79 622 aa6.47□□□□□ -1.37
ATP6V1C1-204ENST00000518959 SOX1O00570 391 aaPredicted RBP6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TRPA1O75762 1119 aa6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 RFX1P22670 979 aa6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 MAP7Q14244 749 aa6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ZNF765Q7L2R6 523 aa6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 C2CD4AQ8NCU7 369 aaPredicted RBP6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 BCL7CQ8WUZ0 217 aaPredicted RBP6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 DZANK1Q9NVP4 752 aa6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TMEM63CQ9P1W3 806 aa6.46□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 RAB6AP20340 208 aa6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 SOX4Q06945 474 aaPredicted RBP6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 NAA30Q147X3 362 aaPredicted RBP6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 HHIPQ96QV1 700 aa6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 MKNK1Q9BUB5 465 aa6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 CNTN3Q9P232 1028 aa6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 SALL4Q9UJQ4 1053 aa6.45□□□□□ -1.38
ATP6V1C1-204ENST00000518959 NFKBIEO00221 500 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 DLGAP3O95886 979 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 NFICP08651 508 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ZNF865P0CJ78 1059 aaPredicted RBP6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ATG4DQ86TL0 474 aaPredicted RBP6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 BSNDQ8WZ55 320 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 GATA6Q92908 595 aa6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 RC3H2Q9HBD1 1191 aaKnown RBP6.44□□□□□ -1.38
ATP6V1C1-204ENST00000518959 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ABTB2Q8N961 1025 aa6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 C1orf127Q8N9H9 656 aa6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TTC16Q8NEE8 873 aa6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 NUDT16Q96DE0 195 aaKnown RBP6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 STIM2Q9P246 746 aa6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.43□□□□□ -1.38
ATP6V1C1-204ENST00000518959 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 GSTM4Q03013 218 aa6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 BNIP3Q12983 259 aa6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 SWI5Q1ZZU3 235 aa6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 VN1R5Q7Z5H4 357 aa6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 PROSER2Q86WR7 435 aaPredicted RBP6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 TMEM102Q8N9M5 508 aaPredicted RBP6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 NOVA2Q9UNW9 492 aaKnown RBP6.42□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ZBTB39O15060 712 aa6.41□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ADH5P11766 374 aa6.41□□□□□ -1.38
ATP6V1C1-204ENST00000518959 DYMQ7RTS9 669 aa6.41□□□□□ -1.38
ATP6V1C1-204ENST00000518959 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
ATP6V1C1-204ENST00000518959 FAM84AQ96KN4 292 aa6.41□□□□□ -1.38
ATP6V1C1-204ENST00000518959 OSMRQ99650 979 aa6.41□□□□□ -1.38
ATP6V1C1-204ENST00000518959 SOX17Q9H6I2 414 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms