RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 HAUS7Q99871 368 aa11.55□□□□□ -0.56
CLN8-203ENST00000518780 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
CLN8-203ENST00000518780 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 PDE4AP27815 886 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
CLN8-203ENST00000518780 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
CLN8-203ENST00000518780 RASSF7Q02833 373 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 RASGRF1Q13972 1273 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
CLN8-203ENST00000518780 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
CLN8-203ENST00000518780 TTLL5Q6EMB2 1281 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
CLN8-203ENST00000518780 DBNDD1Q9H9R9 158 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
CLN8-203ENST00000518780 HMG20BQ9P0W2 317 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 MYO3BQ8WXR4 1341 aa11.54□□□□□ -0.56
CLN8-203ENST00000518780 MCAMP43121 646 aa11.53□□□□□ -0.56
CLN8-203ENST00000518780 C9orf131Q5VYM1 1079 aa11.53□□□□□ -0.56
CLN8-203ENST00000518780 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
CLN8-203ENST00000518780 OTUD7AQ8TE49 926 aaPredicted RBP11.53□□□□□ -0.56
CLN8-203ENST00000518780 BCL11AQ9H165 835 aa11.53□□□□□ -0.56
CLN8-203ENST00000518780 RNF181Q9P0P0 153 aa11.53□□□□□ -0.56
CLN8-203ENST00000518780 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.57
CLN8-203ENST00000518780 RPS12P25398 132 aaKnown RBP11.52□□□□□ -0.57
CLN8-203ENST00000518780 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 AGBL3Q8NEM8 1001 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 EVI5LQ96CN4 794 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.57
CLN8-203ENST00000518780 YDJCA8MPS7 323 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 PRELPP51888 382 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 GTF2IP78347 998 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 CXCL9Q07325 125 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 BMP2KLQ5H9B9 411 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 DACT2Q5SW24 774 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 GPC2Q8N158 579 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 PAG1Q9NWQ8 432 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
CLN8-203ENST00000518780 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
CLN8-203ENST00000518780 ZFYP08048 801 aaPredicted RBP11.5□□□□□ -0.57
CLN8-203ENST00000518780 ZAP70P43403 619 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
CLN8-203ENST00000518780 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 SCARF1Q14162 830 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 MFSD14BQ5SR56 506 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
CLN8-203ENST00000518780 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 DPF2Q92785 391 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLN8-203ENST00000518780 IQSEC3Q9UPP2 1182 aaPredicted RBP11.5□□□□□ -0.57
CLN8-203ENST00000518780 MAST3O60307 1309 aa11.5□□□□□ -0.57
CLN8-203ENST00000518780 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 RAD17O75943 681 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
CLN8-203ENST00000518780 RGS3P49796 1198 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 GSTO1P78417 241 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
CLN8-203ENST00000518780 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 DNAJC2Q99543 621 aaKnown RBP11.49□□□□□ -0.57
CLN8-203ENST00000518780 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 LRP2BPQ9P2M1 347 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 A0A1B0GUL6 1792 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
CLN8-203ENST00000518780 HIP1O00291 1037 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 GOLIM4O00461 696 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 PSMD14O00487 310 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 NPM3O75607 178 aaKnown RBP11.48□□□□□ -0.57
CLN8-203ENST00000518780 LDHCP07864 332 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 TSHZ3Q63HK5 1081 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 CERS3Q8IU89 383 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
CLN8-203ENST00000518780 GMLQ99445 158 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 ABCF2Q9UG63 623 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 HDAC9Q9UKV0 1011 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
CLN8-203ENST00000518780 GLTPD2A6NH11 291 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 PI16Q6UXB8 463 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
CLN8-203ENST00000518780 COL4A5P29400 1685 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 EIF5BO60841 1220 aaKnown RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 MAP4K4O95819 1239 aaPredicted RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 SDSP20132 328 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms