RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 SF3A1Q15459 793 aaKnown RBP11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 TPM4P67936 248 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 AMOTQ4VCS5 1084 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 ADALQ6DHV7 355 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
ARFGEF1-203ENST00000518230 ZNF609O15014 1411 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 NCAPD2Q15021 1401 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 JCADQ9P266 1359 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 SLC3A2P08195 630 aaKnown RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 GNL2Q13823 731 aaKnown RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 REXO1L1PQ8IX06 675 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 LCMT1Q9UIC8 334 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 NEDD4P46934 1319 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 SMC1AQ14683 1233 aaKnown RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 STK38Q15208 465 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 DHX32Q7L7V1 743 aaKnown RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 MED1Q15648 1581 aaPredicted RBP11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
ARFGEF1-203ENST00000518230 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 TRIM66O15016 1216 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 NRDCO43847 1150 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 HSP90AA4PQ58FG1 418 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 LINC00301Q8NCQ3 95 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 ZNF202O95125 648 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 ATF3P18847 181 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 NLRP12P59046 1061 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 TFCP2Q12800 502 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 MCMDC2Q4G0Z9 681 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 CC2D1AQ6P1N0 951 aaPredicted RBP11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 WDR24Q96S15 920 aa11.31□□□□□ -0.6
ARFGEF1-203ENST00000518230 PXDNQ92626 1479 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 EFCAB8A8MWE9 144 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 SERPINC1P01008 464 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 HOXB7P09629 217 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 UBASH3AP57075 661 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 C10orf67Q8IYJ2 551 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 RTEL1Q9NZ71 1219 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 MST1RQ04912 1400 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 IGKV5-2P06315 115 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 DBNDD2Q9BQY9 259 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
ARFGEF1-203ENST00000518230 VWA3AA6NCI4 1184 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 ATP5JP18859 108 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 MARCKSP29966 332 aaPredicted RBP11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 KCNJ6P48051 423 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 BPIFA3Q9BQP9 254 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 SPTLC2O15270 562 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 GNG11P61952 73 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 ATL3Q6DD88 541 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 PARD6BQ9BYG5 372 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 SALL1Q9NSC2 1324 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 PPP2R2CQ9Y2T4 447 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
ARFGEF1-203ENST00000518230 E7EWF7 191 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 TUBB4AP04350 444 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 PFKFB1P16118 471 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 LMAN1P49257 510 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 ADAM21Q9UKJ8 722 aa11.28□□□□□ -0.6
ARFGEF1-203ENST00000518230 LMO7Q8WWI1 1683 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms