RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TSPY4P0CV99 314 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 TSPY10P0CW01 314 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 MX2P20592 715 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 CLK2P49760 499 aaKnown RBP5.18□□□□□ -1.58
CPNE3-204ENST00000517862 MAP1SQ66K74 1059 aaPredicted RBP5.18□□□□□ -1.58
CPNE3-204ENST00000517862 FBXO46Q6PJ61 603 aaPredicted RBP5.18□□□□□ -1.58
CPNE3-204ENST00000517862 SAGE1Q9NXZ1 904 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 PIM2Q9P1W9 311 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 COG6Q9Y2V7 657 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 CFAP54Q96N23 3096 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 ALS2Q96Q42 1657 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 TRPM7Q96QT4 1865 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 FLNBO75369 2602 aaKnown RBP5.17□□□□□ -1.58
CPNE3-204ENST00000517862 ZNF318Q5VUA4 2279 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 CRB1P82279 1406 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 NAIPQ13075 1403 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 IQCA1LA6NCM1 817 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 TRPA1O75762 1119 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 AMPD1P23109 780 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 INTS3Q68E01 1043 aaKnown RBP5.17□□□□□ -1.58
CPNE3-204ENST00000517862 LINC00114Q6XXX2 140 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 FLAD1Q8NFF5 587 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 ZNF837Q96EG3 531 aaPredicted RBP5.17□□□□□ -1.58
CPNE3-204ENST00000517862 TRERF1Q96PN7 1200 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.17□□□□□ -1.58
CPNE3-204ENST00000517862 TAF1DQ9H5J8 278 aaPredicted RBP5.17□□□□□ -1.58
CPNE3-204ENST00000517862 TPSG1Q9NRR2 321 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 CFAP47Q6ZTR5 3102 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 USP54Q70EL1 1684 aa5.17□□□□□ -1.58
CPNE3-204ENST00000517862 SCN4AP35499 1836 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 WNK3Q9BYP7 1800 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 CASKIN1Q8WXD9 1431 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 NAV2Q8IVL1 2488 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 RFC5P40937 340 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 IRAK1P51617 712 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 NBPF1Q3BBV0 1214 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 DPF3Q92784 378 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 ZIC5Q96T25 663 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 TBC1D2Q9BYX2 928 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 CUEDC1Q9NWM3 386 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-204ENST00000517862 LIMD1Q9UGP4 676 aa5.16□□□□□ -1.58
CPNE3-204ENST00000517862 TRPM3Q9HCF6 1732 aaPredicted RBP5.15□□□□□ -1.58
CPNE3-204ENST00000517862 SCN11AQ9UI33 1791 aa5.15□□□□□ -1.58
CPNE3-204ENST00000517862 SPDYE5A6NIY4 337 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 EXOC5O00471 708 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 DDNO94850 711 aaPredicted RBP5.15□□□□□ -1.59
CPNE3-204ENST00000517862 ELNP15502 786 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 KCNA3P22001 575 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 MAP2K3P46734 347 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 NOGQ13253 232 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 RETREG2Q8NC44 543 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 MAFAQ8NHW3 353 aaPredicted RBP5.15□□□□□ -1.59
CPNE3-204ENST00000517862 RNF186Q9NXI6 227 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 EMILIN1Q9Y6C2 1016 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 ZFHX4Q86UP3 3567 aa5.15□□□□□ -1.59
CPNE3-204ENST00000517862 FMR1Q06787 632 aaKnown RBP eCLIP5.14□□□□□ -1.59
CPNE3-204ENST00000517862 CSPP1Q1MSJ5 1256 aa5.14□□□□□ -1.59
CPNE3-204ENST00000517862 CST9Q5W186 159 aa5.14□□□□□ -1.59
CPNE3-204ENST00000517862 AEBP1Q8IUX7 1158 aa5.14□□□□□ -1.59
CPNE3-204ENST00000517862 GUCD1Q96NT3 240 aa5.14□□□□□ -1.59
CPNE3-204ENST00000517862 GDPD2Q9HCC8 539 aa5.14□□□□□ -1.59
CPNE3-204ENST00000517862 SERPINA10Q9UK55 444 aa5.14□□□□□ -1.59
CPNE3-204ENST00000517862 ZNF330Q9Y3S2 320 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-204ENST00000517862 TPRP12270 2363 aaKnown RBP5.13□□□□□ -1.59
CPNE3-204ENST00000517862 MMP10P09238 476 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 GRM5P41594 1212 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 SAPCD2Q86UD0 394 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 TRIM22Q8IYM9 498 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 SYNE4Q8N205 404 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 MTMR14Q8NCE2 650 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 EDARADDQ8WWZ3 215 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 CCNL1Q9UK58 526 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-204ENST00000517862 IRS2Q9Y4H2 1338 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 ADAMTSL1Q8N6G6 1762 aa5.13□□□□□ -1.59
CPNE3-204ENST00000517862 LMO7Q8WWI1 1683 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 LY75O60449 1722 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 C5orf42Q9H799 3197 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 POM121CA8CG34 1229 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 ITGB8P26012 769 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 ABL2P42684 1182 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 NHLH1Q02575 133 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 TOM1L2Q6ZVM7 507 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 POLMQ9NP87 494 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-204ENST00000517862 DICER1Q9UPY3 1922 aaKnown RBP5.12□□□□□ -1.59
CPNE3-204ENST00000517862 ACEP12821 1306 aa5.12□□□□□ -1.59
CPNE3-204ENST00000517862 COL5A2P05997 1499 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-204ENST00000517862 HTTP42858 3142 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 CTSOP43234 321 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-204ENST00000517862 ERFEQ4G0M1 354 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 TMEM31Q5JXX7 168 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 ERMP1Q7Z2K6 904 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 RIC3Q7Z5B4 369 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 ANKRD24Q8TF21 1146 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 SPIRE2Q8WWL2 714 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 HHIPL1Q96JK4 782 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 TRAIPQ9BWF2 469 aa5.11□□□□□ -1.59
CPNE3-204ENST00000517862 GDF2Q9UK05 429 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms