RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
SPIDR-204ENST00000517824 GJB2P29033 226 aa12.77□□□□□ -0.37
SPIDR-204ENST00000517824 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
SPIDR-204ENST00000517824 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
SPIDR-204ENST00000517824 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
SPIDR-204ENST00000517824 APPBP2Q92624 585 aa12.77□□□□□ -0.37
SPIDR-204ENST00000517824 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-204ENST00000517824 RTL9Q8NET4 1388 aa12.77□□□□□ -0.37
SPIDR-204ENST00000517824 MYH6P13533 1939 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 STX6O43752 255 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 PRPF40AO75400 957 aaKnown RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 PHF14O94880 888 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 PDE8BO95263 885 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 HCLS1P14317 486 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 MRE11P49959 708 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 C1QTNF8P60827 252 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 SUSD4Q5VX71 490 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 LPIN2Q92539 896 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 NYXQ9GZU5 481 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 ALDH8A1Q9H2A2 487 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 NAP1L2Q9ULW6 460 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-204ENST00000517824 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
SPIDR-204ENST00000517824 ZPR1O75312 459 aa12.75□□□□□ -0.37
SPIDR-204ENST00000517824 LAMB1P07942 1786 aa12.75□□□□□ -0.37
SPIDR-204ENST00000517824 ZAP70P43403 619 aa12.75□□□□□ -0.37
SPIDR-204ENST00000517824 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
SPIDR-204ENST00000517824 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
SPIDR-204ENST00000517824 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
SPIDR-204ENST00000517824 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
SPIDR-204ENST00000517824 M0R2C6 588 aa12.74□□□□□ -0.37
SPIDR-204ENST00000517824 RGL2O15211 777 aa12.74□□□□□ -0.37
SPIDR-204ENST00000517824 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
SPIDR-204ENST00000517824 NTSR2O95665 410 aa12.74□□□□□ -0.37
SPIDR-204ENST00000517824 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
SPIDR-204ENST00000517824 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-204ENST00000517824 GNL3LQ9NVN8 582 aaKnown RBP12.74□□□□□ -0.37
SPIDR-204ENST00000517824 LARGE1O95461 756 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 F13A1P00488 732 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPIDR-204ENST00000517824 MAP3K12Q12852 859 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 STK3Q13188 491 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 ME3Q16798 604 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 Q6ZUG5 572 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 NECAB1Q8N987 351 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 FAM184AQ8NB25 1140 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 LINC00116Q8NCU8 138 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 TCEANC2Q96MN5 208 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 UBR3Q6ZT12 1888 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 KIAA1551Q9HCM1 1747 aa12.73□□□□□ -0.37
SPIDR-204ENST00000517824 TIAM2Q8IVF5 1701 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 GNPATO15228 680 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 APPP05067 770 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 CYP21A2P08686 494 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 SYT1P21579 422 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 MCAMP43121 646 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 TRDNQ13061 729 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 LARP1BQ659C4 914 aaKnown RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 BICDL1Q6ZP65 573 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
SPIDR-204ENST00000517824 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
SPIDR-204ENST00000517824 H3BQV1 296 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 SLC9C2Q5TAH2 1124 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.37
SPIDR-204ENST00000517824 IFFO2Q5TF58 517 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
SPIDR-204ENST00000517824 VPS37DQ86XT2 251 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 HELBQ8NG08 1087 aaPredicted RBP12.71□□□□□ -0.37
SPIDR-204ENST00000517824 GTF3C6Q969F1 213 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 AIDAQ96BJ3 306 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 SETDB2Q96T68 719 aa12.71□□□□□ -0.37
SPIDR-204ENST00000517824 FSD2A1L4K1 749 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 E7EWF7 191 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 ZNF213O14771 459 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 GPAA1O43292 621 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 FIBPO43427 364 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 ADD2P35612 726 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 PHKA1P46020 1223 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 HMGN5P82970 282 aaKnown RBP12.7□□□□□ -0.38
SPIDR-204ENST00000517824 TOB2Q14106 344 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-204ENST00000517824 SCARF1Q14162 830 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 AMIGO3Q86WK7 504 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
SPIDR-204ENST00000517824 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms