RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CCDC85AQ96PX6 553 aaPredicted RBP3.64□□□□□ -1.83
SKP1-204ENST00000517691 ARHGAP9Q9BRR9 750 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 UNC93B1Q9H1C4 597 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 POLKQ9UBT6 870 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 ALS2Q96Q42 1657 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 SLIT2O94813 1529 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 SPATA31A1Q5TZJ5 1347 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 WDR17Q8IZU2 1322 aa3.64□□□□□ -1.83
SKP1-204ENST00000517691 OVOS2A0A0J9YW53 1432 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 ATRNO75882 1429 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 OVOS2Q6IE36 1432 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 ATP5J2-PTCD1G3V325 749 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 SCNN1AP37088 669 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 MTHFSP49914 203 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 JAG1P78504 1218 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 DPYDQ12882 1025 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 PDE3BQ13370 1112 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 MAP7D1Q3KQU3 841 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 LINC01559Q495D7 138 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 NBPF14Q5TI25 921 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 SH3RF1Q7Z6J0 888 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 ANKMY2Q8IV38 441 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 OGFOD1Q8N543 542 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 USHBP1Q8N6Y0 703 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 FAM200AQ8TCP9 573 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 GIPC2Q8TF65 315 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 UBXN4Q92575 508 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 CLP1Q92989 425 aaKnown RBP3.63□□□□□ -1.83
SKP1-204ENST00000517691 CARD10Q9BWT7 1032 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 PIK3C2AO00443 1686 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 SLIT3O75094 1523 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 NSD2O96028 1365 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 CAMTA1Q9Y6Y1 1673 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 EXOC5O00471 708 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 SIAH2O43255 324 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 GIGYF1O75420 1035 aaPredicted RBP3.63□□□□□ -1.83
SKP1-204ENST00000517691 C4orf48Q5BLP8 95 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 FAM182BQ5T319 152 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 KRT27Q7Z3Y8 459 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 BAP1Q92560 729 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 BCL2L13Q9BXK5 485 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 KIAA1024Q9UPX6 916 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 THRAP3Q9Y2W1 955 aaKnown RBP3.63□□□□□ -1.83
SKP1-204ENST00000517691 RIPOR2Q9Y4F9 1068 aa3.63□□□□□ -1.83
SKP1-204ENST00000517691 NRKQ7Z2Y5 1582 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 AKAP12Q02952 1782 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 CRB1P82279 1406 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 SMG6Q86US8 1419 aaKnown RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 MON2Q7Z3U7 1717 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 A0A0U1RQG5 324 aaPredicted RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 BCRP11274 1271 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 ARID4AP29374 1257 aaPredicted RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 SH3BP2P78314 561 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 DDB1Q16531 1140 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 NAALADL2Q58DX5 795 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 NBPF6Q5VWK0 638 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 B4GALNT3Q6L9W6 998 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 ZBTB33Q86T24 672 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 RAPGEF4Q8WZA2 1011 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 ZNF594Q96JF6 807 aaPredicted RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 NBPF4Q96M43 638 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 CFAP53Q96M91 514 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 FLT4P35916 1363 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 COL5A2P05997 1499 aaPredicted RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 MYOM1P52179 1685 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 COL14A1Q05707 1796 aaKnown RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 BLMP54132 1417 aaPredicted RBP3.62□□□□□ -1.83
SKP1-204ENST00000517691 NFAT5O94916 1531 aa3.62□□□□□ -1.83
SKP1-204ENST00000517691 C1QTNF9BB2RNN3 333 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 U2SURPO15042 1029 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 NEFLP07196 543 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 IL2RBP14784 551 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 TATP17735 454 aaPredicted RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 ATP2B4P23634 1241 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 PPP2R1AP30153 589 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 EIF4A2Q14240 407 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 EML3Q32P44 896 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 DZIP3Q86Y13 1208 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 DDX54Q8TDD1 881 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 MICAL1Q8TDZ2 1067 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 FOXJ1Q92949 421 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 DNAAF2Q9NVR5 837 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 RTL1A6NKG5 1358 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 INSRP06213 1382 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 PHRF1Q9P1Y6 1649 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 RGS12O14924 1447 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 KIF24Q5T7B8 1368 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 NPC1L1Q9UHC9 1359 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 DIAPH1O60610 1272 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 RAB11FIP3O75154 756 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 TAGLNQ01995 201 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 SF3B2Q13435 895 aaKnown RBP3.61□□□□□ -1.83
SKP1-204ENST00000517691 RALBP1Q15311 655 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.61□□□□□ -1.837e-8■■■■■ 40
SKP1-204ENST00000517691 ERFEQ4G0M1 354 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 SULT6B1Q6IMI4 303 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 DPH6Q7L8W6 267 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 SIX5Q8N196 739 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 LARGE2Q8N3Y3 721 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 NOD1Q9Y239 953 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms