RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PRAMEF18Q5VWM3 479 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 COA1Q9GZY4 146 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 CHMP3Q9Y3E7 222 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 CUL9Q8IWT3 2517 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 KCNJ4P48050 445 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 ZNF280AP59817 542 aaPredicted RBP13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 CHRNDQ07001 517 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 SCARF1Q14162 830 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 CCDC57Q2TAC2 916 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 GMLQ99445 158 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 PRO3102Q9H379 93 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 ZNF609O15014 1411 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 PTPRCP08575 1304 aa13.35□□□□□ -0.27
PDGFRB-203ENST00000517660 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
PDGFRB-203ENST00000517660 USP17L8P0C7I0 530 aa13.34□□□□□ -0.27
PDGFRB-203ENST00000517660 ALDH1L2Q3SY69 923 aa13.34□□□□□ -0.27
PDGFRB-203ENST00000517660 TAF7LQ5H9L4 462 aa13.34□□□□□ -0.27
PDGFRB-203ENST00000517660 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
PDGFRB-203ENST00000517660 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
PDGFRB-203ENST00000517660 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
PDGFRB-203ENST00000517660 STRIP1Q5VSL9 837 aa13.33□□□□□ -0.28
PDGFRB-203ENST00000517660 LDHAL6AQ6ZMR3 332 aa13.33□□□□□ -0.28
PDGFRB-203ENST00000517660 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
PDGFRB-203ENST00000517660 UTYO14607 1347 aa13.33□□□□□ -0.28
PDGFRB-203ENST00000517660 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 TAF5LO75529 589 aa13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 MYOZ2Q9NPC6 264 aa13.32□□□□□ -0.28
PDGFRB-203ENST00000517660 KIAA0100Q14667 2235 aaKnown RBP13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 KLRK1P26718 216 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 MMP14P50281 582 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 PTPN12Q05209 780 aaKnown RBP13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 CD99L2Q8TCZ2 262 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 FBXW7Q969H0 707 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 CD209Q9NNX6 404 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 MYO3BQ8WXR4 1341 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
PDGFRB-203ENST00000517660 SPTBN5Q9NRC6 3674 aaKnown RBP13.3□□□□□ -0.28
PDGFRB-203ENST00000517660 SNAP23O00161 211 aa13.3□□□□□ -0.28
PDGFRB-203ENST00000517660 IGF2BP3O00425 579 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDGFRB-203ENST00000517660 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
PDGFRB-203ENST00000517660 SPRYD7Q5W111 196 aa13.3□□□□□ -0.28
PDGFRB-203ENST00000517660 MXD3Q9BW11 206 aa13.3□□□□□ -0.28
PDGFRB-203ENST00000517660 PLIN1O60240 522 aa13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 GTF2IP78347 998 aa13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 RABL6Q3YEC7 729 aaPredicted RBP13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 CEP290O15078 2479 aa13.29□□□□□ -0.28
PDGFRB-203ENST00000517660 UBE4AQ14139 1066 aa13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 ZNF804AQ7Z570 1209 aa13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 ANKRD44Q8N8A2 993 aa13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 VCANP13611 3396 aa13.28□□□□□ -0.28
PDGFRB-203ENST00000517660 IL1R1P14778 569 aa13.27□□□□□ -0.29
PDGFRB-203ENST00000517660 NBPF9Q3BBW0 867 aa13.27□□□□□ -0.29
PDGFRB-203ENST00000517660 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
PDGFRB-203ENST00000517660 FZD1Q9UP38 647 aa13.27□□□□□ -0.29
PDGFRB-203ENST00000517660 RIPOR2Q9Y4F9 1068 aa13.27□□□□□ -0.29
PDGFRB-203ENST00000517660 ALDH1A1P00352 501 aa13.26□□□□□ -0.29
PDGFRB-203ENST00000517660 LAMB1P07942 1786 aa13.26□□□□□ -0.29
PDGFRB-203ENST00000517660 MROH5Q6ZUA9 1318 aa13.26□□□□□ -0.29
PDGFRB-203ENST00000517660 KIAA0825Q8IV33 1275 aa13.26□□□□□ -0.29
PDGFRB-203ENST00000517660 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
PDGFRB-203ENST00000517660 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
PDGFRB-203ENST00000517660 MYH3P11055 1940 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 WNT10BO00744 389 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 SASH1O94885 1247 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 RARSP54136 660 aaKnown RBP13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 CRHR2Q13324 411 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 TTLL12Q14166 644 aaPredicted RBP13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 DIEXFQ68CQ4 756 aaKnown RBP13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 MIER1Q8N108 512 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 TMEM106CQ9BVX2 250 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 COL25A1Q9BXS0 654 aaPredicted RBP13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
PDGFRB-203ENST00000517660 PTCH2Q9Y6C5 1203 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms