RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 APOBRQ0VD83 1088 aa23.33■■□□□ 1.32
HOXA11-202ENST00000517402 TTF1Q15361 905 aaPredicted RBP23.33■■□□□ 1.32
HOXA11-202ENST00000517402 FERMT3Q86UX7 667 aa23.33■■□□□ 1.32
HOXA11-202ENST00000517402 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.32
HOXA11-202ENST00000517402 GNPATO15228 680 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 MBD3O95983 291 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 UQCRFS1P1P0C7P4 283 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 ZNF445P59923 1031 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 DNM1Q05193 864 aaKnown RBP23.32■■□□□ 1.32
HOXA11-202ENST00000517402 SCRN1Q12765 414 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 SPATA5Q8NB90 893 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 ATRNO75882 1429 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 PDE6AP16499 860 aa23.32■■□□□ 1.32
HOXA11-202ENST00000517402 CCNL1Q9UK58 526 aaPredicted RBP23.32■■□□□ 1.32
HOXA11-202ENST00000517402 DOCK2Q92608 1830 aa23.31■■□□□ 1.32
HOXA11-202ENST00000517402 BCAMP50895 628 aa23.31■■□□□ 1.32
HOXA11-202ENST00000517402 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
HOXA11-202ENST00000517402 A0A1B0GUL6 1792 aa23.31■■□□□ 1.32
HOXA11-202ENST00000517402 WTIPA6NIX2 430 aaPredicted RBP23.3■■□□□ 1.32
HOXA11-202ENST00000517402 IMMTQ16891 758 aaKnown RBP23.3■■□□□ 1.32
HOXA11-202ENST00000517402 ZSCAN25Q6NSZ9 544 aa23.3■■□□□ 1.32
HOXA11-202ENST00000517402 RTN4Q9NQC3 1192 aaKnown RBP23.3■■□□□ 1.32
HOXA11-202ENST00000517402 SYCE3A1L190 88 aa23.3■■□□□ 1.32
HOXA11-202ENST00000517402 TMEM87AQ8NBN3 555 aa23.3■■□□□ 1.32
HOXA11-202ENST00000517402 GPHNQ9NQX3 736 aaPredicted RBP23.3■■□□□ 1.32
HOXA11-202ENST00000517402 FAM173BQ6P4H8 233 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 CCDC24Q8N4L8 307 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 DDX11Q96FC9 970 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 AGXT2Q9BYV1 514 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 CTNNA3Q9UI47 895 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 ATP6V1DQ9Y5K8 247 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 TCRBV5S4A2TA0A5A2 114 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 GJD4Q96KN9 370 aaPredicted RBP23.29■■□□□ 1.32
HOXA11-202ENST00000517402 SBF2Q86WG5 1849 aa23.29■■□□□ 1.32
HOXA11-202ENST00000517402 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
HOXA11-202ENST00000517402 UBE3CQ15386 1083 aa23.28■■□□□ 1.32
HOXA11-202ENST00000517402 CDC5LQ99459 802 aaKnown RBP23.28■■□□□ 1.32
HOXA11-202ENST00000517402 NAP1L2Q9ULW6 460 aaPredicted RBP23.28■■□□□ 1.32
HOXA11-202ENST00000517402 IQSEC3Q9UPP2 1182 aaPredicted RBP23.28■■□□□ 1.32
HOXA11-202ENST00000517402 PPFIA3O75145 1194 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 RPS6KA4O75676 772 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 PDCP20941 246 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 CCT2P78371 535 aaKnown RBP23.27■■□□□ 1.32
HOXA11-202ENST00000517402 NCOA5Q9HCD5 579 aaKnown RBP23.27■■□□□ 1.32
HOXA11-202ENST00000517402 NARFQ9UHQ1 456 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 AFF2P51816 1311 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 LY75O60449 1722 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 PFKFB2O60825 505 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 NBPF3Q9H094 633 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 DENND2AQ9ULE3 1009 aa23.27■■□□□ 1.32
HOXA11-202ENST00000517402 ANKRD18AQ8IVF6 992 aa23.26■■□□□ 1.31
HOXA11-202ENST00000517402 MAGEB6Q8N7X4 407 aa23.26■■□□□ 1.31
HOXA11-202ENST00000517402 COL24A1Q17RW2 1714 aa23.26■■□□□ 1.31
HOXA11-202ENST00000517402 RC3H1Q5TC82 1133 aaKnown RBP23.26■■□□□ 1.31
HOXA11-202ENST00000517402 CELF1Q92879 486 aaKnown RBP23.26■■□□□ 1.31
HOXA11-202ENST00000517402 ZNF213O14771 459 aa23.25■■□□□ 1.31
HOXA11-202ENST00000517402 CTDNEP1O95476 244 aa23.25■■□□□ 1.31
HOXA11-202ENST00000517402 APPP05067 770 aa23.25■■□□□ 1.31
HOXA11-202ENST00000517402 SF3B3Q15393 1217 aaKnown RBP23.25■■□□□ 1.31
HOXA11-202ENST00000517402 C4AP0C0L4 1744 aa23.25■■□□□ 1.31
HOXA11-202ENST00000517402 C4BP0C0L5 1744 aa23.25■■□□□ 1.31
HOXA11-202ENST00000517402 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
HOXA11-202ENST00000517402 NSUN7Q8NE18 718 aaKnown RBP23.24■■□□□ 1.31
HOXA11-202ENST00000517402 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
HOXA11-202ENST00000517402 AIDAQ96BJ3 306 aa23.24■■□□□ 1.31
HOXA11-202ENST00000517402 ZPR1O75312 459 aa23.24■■□□□ 1.31
HOXA11-202ENST00000517402 PHF14O94880 888 aa23.24■■□□□ 1.31
HOXA11-202ENST00000517402 ANTXR2P58335 489 aa23.24■■□□□ 1.31
HOXA11-202ENST00000517402 RTCBQ9Y3I0 505 aaKnown RBP23.24■■□□□ 1.31
HOXA11-202ENST00000517402 PDIA3P30101 505 aaKnown RBP23.23■■□□□ 1.31
HOXA11-202ENST00000517402 GYG1P46976 350 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 TBC1D10CQ8IV04 446 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
HOXA11-202ENST00000517402 SETDB2Q96T68 719 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 PTPDC1A2A3K4 754 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 PRC1O43663 620 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 NASPP49321 788 aaPredicted RBP23.23■■□□□ 1.31
HOXA11-202ENST00000517402 FOSBP53539 338 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 NBPF5PQ86XG9 351 aaPredicted RBP23.23■■□□□ 1.31
HOXA11-202ENST00000517402 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
HOXA11-202ENST00000517402 STRBPQ96SI9 672 aaKnown RBP23.23■■□□□ 1.31
HOXA11-202ENST00000517402 MBD4O95243 580 aa23.22■■□□□ 1.31
HOXA11-202ENST00000517402 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
HOXA11-202ENST00000517402 LRSAM1Q6UWE0 723 aa23.22■■□□□ 1.31
HOXA11-202ENST00000517402 RBSNQ9H1K0 784 aa23.22■■□□□ 1.31
HOXA11-202ENST00000517402 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
HOXA11-202ENST00000517402 UBE2HP62256 183 aa23.21■■□□□ 1.31
HOXA11-202ENST00000517402 RALYLQ86SE5 291 aaKnown RBP23.21■■□□□ 1.31
HOXA11-202ENST00000517402 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
HOXA11-202ENST00000517402 ARMT1Q9H993 441 aa23.21■■□□□ 1.31
HOXA11-202ENST00000517402 EPB41L4AQ9HCS5 686 aaPredicted RBP23.21■■□□□ 1.31
HOXA11-202ENST00000517402 BSDC1Q9NW68 430 aaPredicted RBP23.21■■□□□ 1.31
HOXA11-202ENST00000517402 RAB11FIP4Q86YS3 637 aa23.21■■□□□ 1.31
HOXA11-202ENST00000517402 SEPT12Q8IYM1 358 aa23.21■■□□□ 1.31
HOXA11-202ENST00000517402 MINPP1Q9UNW1 487 aa23.21■■□□□ 1.31
HOXA11-202ENST00000517402 MCM5P33992 734 aa23.2■■□□□ 1.3
HOXA11-202ENST00000517402 FAM184AQ8NB25 1140 aa23.2■■□□□ 1.3
HOXA11-202ENST00000517402 TTC6Q86TZ1 520 aa23.2■■□□□ 1.3
HOXA11-202ENST00000517402 TNRC6CQ9HCJ0 1690 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms