RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 NEFLP07196 543 aa9.75□□□□□ -0.85
SCARNA1-201ENST00000517138 RSPO4Q2I0M5 234 aaPredicted RBP9.75□□□□□ -0.85
SCARNA1-201ENST00000517138 KIAA0319Q5VV43 1072 aa9.75□□□□□ -0.85
SCARNA1-201ENST00000517138 DNAJC25Q9H1X3 360 aa9.75□□□□□ -0.85
SCARNA1-201ENST00000517138 SEC31BQ9NQW1 1179 aa9.75□□□□□ -0.85
SCARNA1-201ENST00000517138 A0A096LPE4 126 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 A0A1W2PPZ6 126 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 ITGB7P26010 798 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 CABP4P57796 275 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 NLRP12P59046 1061 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 MRPL18Q9H0U6 180 aaKnown RBP9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
SCARNA1-201ENST00000517138 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 PIP4K2BP78356 416 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 IKBKEQ14164 716 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 NKAPLQ5M9Q1 402 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 KLHL23Q8NBE8 558 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 EHD4Q9H223 541 aa9.73□□□□□ -0.85
SCARNA1-201ENST00000517138 ADAM23O75077 832 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 SUZ12Q15022 739 aaKnown RBP9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 ZNF423Q2M1K9 1284 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 KIAA1211Q6ZU35 1233 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 ACAD11Q709F0 780 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 ASB16Q96NS5 453 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 WWC3Q9ULE0 1092 aa9.72□□□□□ -0.85
SCARNA1-201ENST00000517138 GADD45BO75293 160 aaPredicted RBP9.71□□□□□ -0.86
SCARNA1-201ENST00000517138 GRM2Q14416 872 aa9.71□□□□□ -0.86
SCARNA1-201ENST00000517138 ABCB6Q9NP58 842 aa9.71□□□□□ -0.86
SCARNA1-201ENST00000517138 K7ELQ4 463 aaPredicted RBP9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 MAPK8P45983 427 aa9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 C19orf57Q0VDD7 668 aa9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 DUOXA2Q1HG44 320 aa9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 TP53INP1Q96A56 240 aa9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 OSGEPQ9NPF4 335 aa9.7□□□□□ -0.86
SCARNA1-201ENST00000517138 FMR1Q06787 632 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCARNA1-201ENST00000517138 PCDH1Q08174 1060 aa9.69□□□□□ -0.86
SCARNA1-201ENST00000517138 WNT8BQ93098 351 aa9.69□□□□□ -0.86
SCARNA1-201ENST00000517138 UBL7Q96S82 380 aaPredicted RBP9.69□□□□□ -0.86
SCARNA1-201ENST00000517138 SEMA6BQ9H3T3 888 aa9.69□□□□□ -0.86
SCARNA1-201ENST00000517138 DLGAP3O95886 979 aa9.68□□□□□ -0.86
SCARNA1-201ENST00000517138 Q6ZS46 218 aa9.68□□□□□ -0.86
SCARNA1-201ENST00000517138 SND1Q7KZF4 910 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCARNA1-201ENST00000517138 DZIP1LQ8IYY4 767 aaKnown RBP9.68□□□□□ -0.86
SCARNA1-201ENST00000517138 PATL2C9JE40 543 aaKnown RBP9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 DYRK3O43781 588 aa9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 GLB1P16278 677 aa9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 ZSCAN29Q8IWY8 852 aaPredicted RBP9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 CLEC4MQ9H2X3 399 aaPredicted RBP9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 ZNF576Q9H609 170 aa9.67□□□□□ -0.86
SCARNA1-201ENST00000517138 P4HBP07237 508 aaKnown RBP9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 CTSBP07858 339 aa9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 ITPKAP23677 461 aa9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 GSTM4Q03013 218 aa9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 DCAF11Q8TEB1 546 aa9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 USP26Q9BXU7 913 aa9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 NRSN2Q9GZP1 204 aa9.66□□□□□ -0.86
SCARNA1-201ENST00000517138 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
SCARNA1-201ENST00000517138 ARL4DP49703 201 aa9.65□□□□□ -0.86
SCARNA1-201ENST00000517138 FAAP100Q0VG06 881 aa9.65□□□□□ -0.86
SCARNA1-201ENST00000517138 PRPF40BQ6NWY9 871 aaKnown RBP9.65□□□□□ -0.86
SCARNA1-201ENST00000517138 NXPE4Q6UWF7 544 aa9.65□□□□□ -0.86
SCARNA1-201ENST00000517138 BCO2Q9BYV7 579 aa9.65□□□□□ -0.86
SCARNA1-201ENST00000517138 LOC100289279A0A1B0GTE1 492 aa9.64□□□□□ -0.87
SCARNA1-201ENST00000517138 ECEL1O95672 775 aa9.64□□□□□ -0.87
SCARNA1-201ENST00000517138 ZNF157P51786 506 aaPredicted RBP9.64□□□□□ -0.87
SCARNA1-201ENST00000517138 SOX17Q9H6I2 414 aaPredicted RBP9.64□□□□□ -0.87
SCARNA1-201ENST00000517138 FCGRTP55899 365 aa9.63□□□□□ -0.87
SCARNA1-201ENST00000517138 TRIM56Q9BRZ2 755 aaKnown RBP9.63□□□□□ -0.87
SCARNA1-201ENST00000517138 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
SCARNA1-201ENST00000517138 RNF19AQ9NV58 838 aa9.63□□□□□ -0.87
SCARNA1-201ENST00000517138 NLRP2Q9NX02 1062 aa9.63□□□□□ -0.87
SCARNA1-201ENST00000517138 B3GALT4O96024 378 aa9.62□□□□□ -0.87
SCARNA1-201ENST00000517138 ARMC10Q8N2F6 343 aa9.62□□□□□ -0.87
SCARNA1-201ENST00000517138 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
SCARNA1-201ENST00000517138 ANKRD33BA6NCL7 494 aa9.61□□□□□ -0.87
SCARNA1-201ENST00000517138 OSBPL7Q9BZF2 842 aa9.61□□□□□ -0.87
SCARNA1-201ENST00000517138 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
SCARNA1-201ENST00000517138 H2AFB2P0C5Z0 115 aa9.6□□□□□ -0.87
SCARNA1-201ENST00000517138 PREPP48147 710 aa9.6□□□□□ -0.87
SCARNA1-201ENST00000517138 TRAK1Q9UPV9 953 aa9.6□□□□□ -0.87
SCARNA1-201ENST00000517138 MAOBP27338 520 aa9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 PRSS36Q5K4E3 855 aa9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 DNAJC14Q6Y2X3 702 aaPredicted RBP9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 DTHD1Q6ZMT9 781 aa9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 PRR23CQ6ZRP0 262 aa9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 FAM46AQ96IP4 442 aaKnown RBP9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 TMPRSS13Q9BYE2 586 aa9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 RNF208Q9H0X6 261 aa9.59□□□□□ -0.87
SCARNA1-201ENST00000517138 PTPN12Q05209 780 aaKnown RBP9.58□□□□□ -0.88
SCARNA1-201ENST00000517138 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
SCARNA1-201ENST00000517138 LDHBP07195 334 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms