RNA–Protein interactions for RNA: ENST00000516288.1

RNU6-346P-201, Transcript of RNA, U6 small nuclear 346, pseudogene, humanhuman

BASIC

Gene RNU6-346P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-346P-201ENST00000516288 PBX4Q9BYU1 374 aa4.41□□□□□ -1.7
RNU6-346P-201ENST00000516288 SH2B1Q9NRF2 756 aaPredicted RBP4.41□□□□□ -1.7
RNU6-346P-201ENST00000516288 MBNL3Q9NUK0 354 aaKnown RBP4.41□□□□□ -1.7
RNU6-346P-201ENST00000516288 SEC13P55735 322 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 C19orf57Q0VDD7 668 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 LRRN4CLQ8ND94 238 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 FLAD1Q8NFF5 587 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 VTI1AQ96AJ9 217 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 RASSF4Q9H2L5 321 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 GDPD2Q9HCC8 539 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 VAV3Q9UKW4 847 aa4.4□□□□□ -1.71
RNU6-346P-201ENST00000516288 CYP27C1Q4G0S4 372 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 EXOSC6Q5RKV6 272 aaKnown RBP4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 TTC39BQ5VTQ0 682 aaPredicted RBP4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 CDPF1Q6NVV7 123 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 ZNF765Q7L2R6 523 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 IL27Q8NEV9 243 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 GATA6Q92908 595 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 MYO19Q96H55 970 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 HINFPQ9BQA5 517 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 ZMYND15Q9H091 742 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 USP20Q9Y2K6 914 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 KCNMB2Q9Y691 235 aa4.39□□□□□ -1.71
RNU6-346P-201ENST00000516288 CD8BP10966 210 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 BNIP3Q12983 259 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 CIAPIN1Q6FI81 312 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 WWC1Q8IX03 1113 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 SLC7A3Q8WY07 619 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 ALG2Q9H553 416 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 FAM13BQ9NYF5 915 aa4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 MKRN1Q9UHC7 482 aaKnown RBP4.38□□□□□ -1.71
RNU6-346P-201ENST00000516288 USP17L3A6NCW0 530 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 USP17L4A6NCW7 530 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 C1QTNF9P0C862 333 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 HOXA5P20719 270 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 PRKCQQ04759 706 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 SOX4Q06945 474 aaPredicted RBP4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 SLC23A3Q6PIS1 610 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 USP17L2Q6R6M4 530 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 USP17L1Q7RTZ2 530 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 NCAPG2Q86XI2 1143 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 TREML1Q86YW5 311 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 WFDC3Q8IUB2 231 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 NETO1Q8TDF5 533 aa4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 ZNF594Q96JF6 807 aaPredicted RBP4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 FNDC3AQ9Y2H6 1198 aaKnown RBP4.37□□□□□ -1.71
RNU6-346P-201ENST00000516288 ZNF503-AS2A6NEH8 195 aa4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 KIF4AO95239 1232 aa4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 TMEM253P0C7T8 217 aa4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 OGFOD3Q6PK18 319 aa4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 C2CD4AQ8NCU7 369 aaPredicted RBP4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 POP1Q99575 1024 aaKnown RBP4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 ADAMTS6Q9UKP5 1117 aa4.36□□□□□ -1.71
RNU6-346P-201ENST00000516288 NPIPB6E9PJ23 425 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 UBAP1LF5GYI3 381 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 FOXO3O43524 673 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 FOXD2O60548 495 aaPredicted RBP4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 IGHA2P01877 340 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 DRD2P14416 443 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 SYN1P17600 705 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 AFMP43652 599 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 COL13A1Q5TAT6 717 aaPredicted RBP4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 ANGEL2Q5VTE6 544 aaKnown RBP4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 MPZL3Q6UWV2 235 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 FBXO15Q8NCQ5 510 aaPredicted RBP4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 PIK3R5Q8WYR1 880 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 USP26Q9BXU7 913 aa4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 QTRT2Q9H974 415 aaKnown RBP4.35□□□□□ -1.71
RNU6-346P-201ENST00000516288 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 DKK1O94907 266 aa4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 NFICP08651 508 aa4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 KCNA10Q16322 511 aa4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 HP1BP3Q5SSJ5 553 aaPredicted RBP4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 CEP120Q8N960 986 aa4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 TMPRSS5Q9H3S3 457 aa4.34□□□□□ -1.71
RNU6-346P-201ENST00000516288 LOC100289279A0A1B0GTE1 492 aa4.33□□□□□ -1.72
RNU6-346P-201ENST00000516288 GLI1P08151 1106 aa4.33□□□□□ -1.72
RNU6-346P-201ENST00000516288 LIN37Q96GY3 246 aaPredicted RBP4.33□□□□□ -1.72
RNU6-346P-201ENST00000516288 HRASLS5Q96KN8 279 aa4.33□□□□□ -1.72
RNU6-346P-201ENST00000516288 TCAF2A6NFQ2 919 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 ATP9BO43861 1147 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 RAB6AP20340 208 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 IKBKEQ14164 716 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 IFI16Q16666 785 aaKnown RBP4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 AOC3Q16853 763 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 ERICH6BQ5W0A0 696 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 ADAMTSL4Q6UY14 1074 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 SOX17Q9H6I2 414 aaPredicted RBP4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 PARD6AQ9NPB6 346 aa4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 ABI2Q9NYB9 513 aaPredicted RBP4.32□□□□□ -1.72
RNU6-346P-201ENST00000516288 TMEM265A0A087WTH1 108 aa4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 LARP1Q6PKG0 1096 aaKnown RBP4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 PRR23BQ6ZRT6 265 aa4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 ARHGAP27Q6ZUM4 889 aa4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 SEMA6CQ9H3T2 930 aa4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 ZFYVE1Q9HBF4 777 aa4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 MKNK2Q9HBH9 465 aa4.31□□□□□ -1.72
RNU6-346P-201ENST00000516288 CRIM1Q9NZV1 1036 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms