RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SGO2Q562F6 1265 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 EXOSC6Q5RKV6 272 aaKnown RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 HP1BP3Q5SSJ5 553 aaPredicted RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 CBLL1Q75N03 491 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 ZNF438Q7Z4V0 828 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 KSR1Q8IVT5 923 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 SMG8Q8ND04 991 aaKnown RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 GPR152Q8TDT2 470 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 ARXQ96QS3 562 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 USP26Q9BXU7 913 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 ELP3Q9H9T3 547 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 SUGCTQ9HAC7 445 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 STIM2Q9P246 746 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 STK11IPQ8N1F8 1099 aa3.69□□□□□ -1.82
RNU6-561P-201ENST00000516222 PRIMPOLQ96LW4 560 aa3.69□□□□□ -1.82
RNU6-561P-201ENST00000516222 ZMYND15Q9H091 742 aa3.69□□□□□ -1.82
RNU6-561P-201ENST00000516222 SLC5A6Q9Y289 635 aa3.69□□□□□ -1.82
RNU6-561P-201ENST00000516222 ACIN1Q9UKV3 1341 aaKnown RBP3.69□□□□□ -1.82
RNU6-561P-201ENST00000516222 TM4SF5O14894 197 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 PRMT3O60678 531 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 PLCL1Q15111 1095 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 FBLN7Q53RD9 439 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 ZAR1Q86SH2 424 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 FBLIM1Q8WUP2 373 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 BSNDQ8WZ55 320 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 TMPRSS13Q9BYE2 586 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 LRRC4CQ9HCJ2 640 aa3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 NOVA2Q9UNW9 492 aaKnown RBP3.68□□□□□ -1.82
RNU6-561P-201ENST00000516222 SLC24A1O60721 1099 aa3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 CYP2E1P05181 493 aaPredicted RBP3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 NAA30Q147X3 362 aaPredicted RBP3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 DDX54Q8TDD1 881 aaKnown RBP3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 SAP130Q9H0E3 1048 aa3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 SOX17Q9H6I2 414 aaPredicted RBP3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 DZANK1Q9NVP4 752 aa3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 SALL4Q9UJQ4 1053 aa3.67□□□□□ -1.82
RNU6-561P-201ENST00000516222 SOX1O00570 391 aaPredicted RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 TIAF1O95411 115 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 EDN3P14138 238 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 DRD2P14416 443 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 SOX4Q06945 474 aaPredicted RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 CYP27C1Q4G0S4 372 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 ZNF648Q5T619 568 aaPredicted RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 FNBP4Q8N3X1 1017 aaPredicted RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 TMEM102Q8N9M5 508 aaPredicted RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 NUDT16Q96DE0 195 aaKnown RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 MISP3Q96FF7 219 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 PAK6Q9NQU5 681 aaPredicted RBP3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 RAD18Q9NS91 495 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 KANSL3Q9P2N6 904 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 PRKAG2Q9UGJ0 569 aa3.66□□□□□ -1.82
RNU6-561P-201ENST00000516222 LOC100289279A0A1B0GTE1 492 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 CYP11A1P05108 521 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 HNRNPUQ00839 825 aaKnown RBP eCLIP3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 GSTM4Q03013 218 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 C8orf34Q49A92 452 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 CDCA8Q53HL2 280 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 CDPF1Q6NVV7 123 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 XKR5Q6UX68 686 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 ATG4DQ86TL0 474 aaPredicted RBP3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 ASAP3Q8TDY4 903 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 TMEM40Q8WWA1 233 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 EZH1Q92800 747 aaPredicted RBP3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 CLUAP1Q96AJ1 413 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 OSMRQ99650 979 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 MKNK1Q9BUB5 465 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 TMEM63CQ9P1W3 806 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 ZC3H7BQ9UGR2 993 aaKnown RBP3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 SOX13Q9UN79 622 aa3.65□□□□□ -1.83
RNU6-561P-201ENST00000516222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 FAM170BA6NMN3 283 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 TNFRSF10BO14763 440 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 ELOAQ14241 798 aaKnown RBP3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 ZNF124Q15973 351 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 ZNF792Q3KQV3 632 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 ADAMTSL4Q6UY14 1074 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 DYMQ7RTS9 669 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 C1orf127Q8N9H9 656 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 C2CD4AQ8NCU7 369 aaPredicted RBP3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 NXPE3Q969Y0 559 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 FAM53CQ9NYF3 392 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 CXXC1Q9P0U4 656 aaPredicted RBP3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 CNTN3Q9P232 1028 aa3.64□□□□□ -1.83
RNU6-561P-201ENST00000516222 NFKBIEO00221 500 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 PAPLNO95428 1278 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 NFICP08651 508 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 RAB6AP20340 208 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 ADMP35318 185 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 DNM1Q05193 864 aaKnown RBP3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 AAMPQ13685 434 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 OCLNQ16625 522 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 OGFOD3Q6PK18 319 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 ARHGAP27Q6ZUM4 889 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 PI4K2BQ8TCG2 481 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 BCL7CQ8WUZ0 217 aaPredicted RBP3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 FAM168AQ92567 244 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 FAM84AQ96KN4 292 aa3.63□□□□□ -1.83
RNU6-561P-201ENST00000516222 TOX2Q96NM4 488 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms