RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
TRIM41-209ENST00000515834 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.41
TRIM41-209ENST00000515834 TCP10Q12799 353 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 FAM47CQ5HY64 1035 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 CEP135Q66GS9 1140 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 PFDN4Q9NQP4 134 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
TRIM41-209ENST00000515834 DAPK3O43293 454 aa12.46□□□□□ -0.41
TRIM41-209ENST00000515834 BMP15O95972 392 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 CNGA1P29973 690 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 SMCR8Q8TEV9 937 aaPredicted RBP12.46□□□□□ -0.42
TRIM41-209ENST00000515834 ANO3Q9BYT9 981 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 M0QZ92 97 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 ZNF165P49910 485 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 CPXCR1Q8N123 301 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 ZBTB9Q96C00 473 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 BCS1LQ9Y276 419 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 NCAPD3P42695 1498 aa12.46□□□□□ -0.42
TRIM41-209ENST00000515834 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
TRIM41-209ENST00000515834 AGTPBP1Q9UPW5 1226 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 GNAT2P19087 354 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 MEIS3Q99687 375 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 ATP6V0A2Q9Y487 856 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
TRIM41-209ENST00000515834 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 CCT6BQ92526 530 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
TRIM41-209ENST00000515834 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 WDR44Q5JSH3 913 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 SRRTQ9BXP5 876 aaKnown RBP12.45□□□□□ -0.42
TRIM41-209ENST00000515834 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 ZSCAN16Q9H4T2 348 aaPredicted RBP12.45□□□□□ -0.42
TRIM41-209ENST00000515834 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 GOLGA6L9A6NEM1 432 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 CSPG5O95196 566 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 CALML3P27482 149 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 PRPHP41219 470 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 PPP2R5CQ13362 524 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
TRIM41-209ENST00000515834 ADCY5O95622 1261 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 EHBP1Q8NDI1 1231 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 GNA11P29992 359 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 TFCP2Q12800 502 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
TRIM41-209ENST00000515834 TTC22Q5TAA0 569 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 TRIM75PA6NK02 468 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
TRIM41-209ENST00000515834 STX17P56962 302 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 NMIQ13287 307 aaPredicted RBP12.44□□□□□ -0.42
TRIM41-209ENST00000515834 TRPC3Q13507 836 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 CCDC6Q16204 474 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 NEK11Q8NG66 645 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
TRIM41-209ENST00000515834 ZBTB16Q05516 673 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 STRN3Q13033 797 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
TRIM41-209ENST00000515834 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
TRIM41-209ENST00000515834 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 UAP1Q16222 522 aaPredicted RBP12.43□□□□□ -0.42
TRIM41-209ENST00000515834 DTHD1Q6ZMT9 781 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 SELENOSQ9BQE4 189 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 E7EVH7 732 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
TRIM41-209ENST00000515834 USH1GQ495M9 461 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 ESPNB1AK53 854 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 STX10O60499 249 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 KIF22Q14807 665 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 RNF169Q8NCN4 708 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 TRERF1Q96PN7 1200 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 CCDC77Q9BR77 488 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 PPP1R7Q15435 360 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 FANCAO15360 1455 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
TRIM41-209ENST00000515834 SORBS3O60504 671 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 UBXN1Q04323 297 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 KIAA1524Q8TCG1 905 aa12.43□□□□□ -0.42
TRIM41-209ENST00000515834 TNPO1Q92973 898 aaKnown RBP12.43□□□□□ -0.42
TRIM41-209ENST00000515834 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 IL27Q8NEV9 243 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 KCNG4Q8TDN1 519 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 CGNQ9P2M7 1197 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms