RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 MTMR6Q9Y217 621 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 GNPATO15228 680 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 GPAA1O43292 621 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 F13A1P00488 732 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 RASGRF1Q13972 1273 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 SLC9C2Q5TAH2 1124 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 CAVIN1Q6NZI2 390 aaKnown RBP17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 DHX32Q7L7V1 743 aaKnown RBP17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 NARFQ9UHQ1 456 aa17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 NSFL1CQ9UNZ2 370 aaKnown RBP17.88■□□□□ 0.45
SH3BP2-229ENST00000515802 IDH1O75874 414 aaKnown RBP17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 EXOSC10Q01780 885 aaKnown RBP17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 CHRNDQ07001 517 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 GTF3C6Q969F1 213 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 FGAP02671 866 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 SPATA5Q8NB90 893 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 BRF1Q92994 677 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 GDPD2Q9HCC8 539 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
SH3BP2-229ENST00000515802 SF3B3Q15393 1217 aaKnown RBP17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 ISY1Q9ULR0 285 aaKnown RBP17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 PDE6AP16499 860 aa17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 UBE3CQ15386 1083 aa17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 AGXT2Q9BYV1 514 aa17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 PRDM4Q9UKN5 801 aa17.86■□□□□ 0.45
SH3BP2-229ENST00000515802 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
SH3BP2-229ENST00000515802 ONECUT3O60422 494 aaPredicted RBP17.85■□□□□ 0.45
SH3BP2-229ENST00000515802 HAND2P61296 217 aa17.85■□□□□ 0.45
SH3BP2-229ENST00000515802 RBM27Q9P2N5 1060 aaKnown RBP17.85■□□□□ 0.45
SH3BP2-229ENST00000515802 CTNNA3Q9UI47 895 aa17.85■□□□□ 0.45
SH3BP2-229ENST00000515802 MRE11P49959 708 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 BCAMP50895 628 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 GRPEL1Q9HAV7 217 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 VPS37CA5D8V6 355 aaPredicted RBP17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 IMMTQ16891 758 aaKnown RBP17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 USP48Q86UV5 1035 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 TMEM87AQ8NBN3 555 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 PANK2Q9BZ23 570 aa17.84■□□□□ 0.45
SH3BP2-229ENST00000515802 LARP1BQ659C4 914 aaKnown RBP17.83■□□□□ 0.45
SH3BP2-229ENST00000515802 ANKRD18AQ8IVF6 992 aa17.83■□□□□ 0.45
SH3BP2-229ENST00000515802 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.45
SH3BP2-229ENST00000515802 JAK2O60674 1132 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 GADD45BO75293 160 aaPredicted RBP17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 ZPR1O75312 459 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 MBD3O95983 291 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 SCRN1Q12765 414 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 CHST3Q7LGC8 479 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 TMEM63CQ9P1W3 806 aa17.83■□□□□ 0.44
SH3BP2-229ENST00000515802 WTIPA6NIX2 430 aaPredicted RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 ZNF445P59923 1031 aa17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 APOBRQ0VD83 1088 aa17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 TNRC6CQ9HCJ0 1690 aaKnown RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 PFKFB2O60825 505 aa17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 NBPF3Q9H094 633 aa17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 BSDC1Q9NW68 430 aaPredicted RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 TRPC5Q9UL62 973 aaPredicted RBP17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 ATP6V1DQ9Y5K8 247 aa17.82■□□□□ 0.44
SH3BP2-229ENST00000515802 PDCP20941 246 aa17.81■□□□□ 0.44
SH3BP2-229ENST00000515802 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
SH3BP2-229ENST00000515802 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
SH3BP2-229ENST00000515802 CHD4Q14839 1912 aa17.81■□□□□ 0.44
SH3BP2-229ENST00000515802 PAXIP1Q6ZW49 1069 aaPredicted RBP17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 MAGEB6Q8N7X4 407 aa17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 ZNF804BA4D1E1 1349 aa17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 DNM1Q05193 864 aaKnown RBP17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 FBXL16Q8N461 479 aa17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 BRWD3Q6RI45 1802 aa17.8■□□□□ 0.44
SH3BP2-229ENST00000515802 MAP3K12Q12852 859 aa17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 STRBPQ96SI9 672 aaKnown RBP17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 ZNF213O14771 459 aa17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 LRRC4BQ9NT99 713 aa17.79■□□□□ 0.44
SH3BP2-229ENST00000515802 FIBPO43427 364 aa17.78■□□□□ 0.44
SH3BP2-229ENST00000515802 PHF14O94880 888 aa17.78■□□□□ 0.44
SH3BP2-229ENST00000515802 CTDNEP1O95476 244 aa17.78■□□□□ 0.44
SH3BP2-229ENST00000515802 GYG1P46976 350 aa17.78■□□□□ 0.44
SH3BP2-229ENST00000515802 ANTXR2P58335 489 aa17.78■□□□□ 0.44
SH3BP2-229ENST00000515802 FERMT3Q86UX7 667 aa17.78■□□□□ 0.44
SH3BP2-229ENST00000515802 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms