RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMEM88BA6NKF7 163 aa6.39□□□□□ -1.39
HERC4-215ENST00000515753 PDGFAP04085 211 aa6.39□□□□□ -1.39
HERC4-215ENST00000515753 HOXA10P31260 410 aaPredicted RBP6.39□□□□□ -1.39
HERC4-215ENST00000515753 DTX1Q86Y01 620 aa6.39□□□□□ -1.39
HERC4-215ENST00000515753 CHRDQ9H2X0 955 aa6.39□□□□□ -1.39
HERC4-215ENST00000515753 OSGEPQ9NPF4 335 aa6.39□□□□□ -1.39
HERC4-215ENST00000515753 SOX1O00570 391 aaPredicted RBP6.38□□□□□ -1.39
HERC4-215ENST00000515753 GAS2O43903 313 aaKnown RBP6.38□□□□□ -1.39
HERC4-215ENST00000515753 SGO2Q562F6 1265 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 XKR5Q6UX68 686 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 FBXL6Q8N531 539 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 TTC16Q8NEE8 873 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 WNT8BQ93098 351 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 OSMRQ99650 979 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 SOX13Q9UN79 622 aa6.38□□□□□ -1.39
HERC4-215ENST00000515753 EREGO14944 169 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 WNT11O96014 354 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 PCSK2P16519 638 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 MPSTP25325 297 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 MAP4P27816 1152 aaKnown RBP6.37□□□□□ -1.39
HERC4-215ENST00000515753 RXRBP28702 533 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 TXKP42681 527 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 ARL4DP49703 201 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 C19orf57Q0VDD7 668 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 MTMR3Q13615 1198 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 NOM1Q5C9Z4 860 aaKnown RBP6.37□□□□□ -1.39
HERC4-215ENST00000515753 C12orf50Q8NA57 414 aaPredicted RBP6.37□□□□□ -1.39
HERC4-215ENST00000515753 HELQQ8TDG4 1101 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 FMNL2Q96PY5 1086 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 USP26Q9BXU7 913 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
HERC4-215ENST00000515753 RPLP1P05386 114 aaKnown RBP6.36□□□□□ -1.39
HERC4-215ENST00000515753 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
HERC4-215ENST00000515753 IKBKEQ14164 716 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 NUTM2GQ5VZR2 741 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 VN1R5Q7Z5H4 357 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 SHISA5Q8N114 240 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 TMEM102Q8N9M5 508 aaPredicted RBP6.36□□□□□ -1.39
HERC4-215ENST00000515753 ASAP3Q8TDY4 903 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 NXPE3Q969Y0 559 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 ZKSCAN3Q9BRR0 538 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 RNF114Q9Y508 228 aa6.36□□□□□ -1.39
HERC4-215ENST00000515753 DLGAP3O95886 979 aa6.35□□□□□ -1.39
HERC4-215ENST00000515753 DRD2P14416 443 aa6.35□□□□□ -1.39
HERC4-215ENST00000515753 MZF1P28698 734 aaPredicted RBP6.35□□□□□ -1.39
HERC4-215ENST00000515753 GTF3C2Q8WUA4 911 aaPredicted RBP6.35□□□□□ -1.39
HERC4-215ENST00000515753 BSNDQ8WZ55 320 aa6.35□□□□□ -1.39
HERC4-215ENST00000515753 HIF3AQ9Y2N7 669 aa6.35□□□□□ -1.39
HERC4-215ENST00000515753 MEGF11A6BM72 1044 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 F13BP05160 661 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 AAMPQ13685 434 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 PMEPA1Q969W9 287 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 TMPRSS13Q9BYE2 586 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 LATS2Q9NRM7 1088 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 ATG3Q9NT62 314 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 PIM2Q9P1W9 311 aa6.34□□□□□ -1.39
HERC4-215ENST00000515753 FOXD3Q9UJU5 478 aaPredicted RBP6.34□□□□□ -1.39
HERC4-215ENST00000515753 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
HERC4-215ENST00000515753 PHACTR2O75167 634 aa6.33□□□□□ -1.4
HERC4-215ENST00000515753 TNFRSF21O75509 655 aa6.33□□□□□ -1.4
HERC4-215ENST00000515753 NFKBIBQ15653 356 aa6.33□□□□□ -1.4
HERC4-215ENST00000515753 FBLIM1Q8WUP2 373 aa6.33□□□□□ -1.4
HERC4-215ENST00000515753 LEMD3Q9Y2U8 911 aa6.33□□□□□ -1.4
HERC4-215ENST00000515753 METTL12A8MUP2 240 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 SSFA2P28290 1259 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 B4GALNT3Q6L9W6 998 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 CDPF1Q6NVV7 123 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 ABI1Q8IZP0 508 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
HERC4-215ENST00000515753 OSBPL1AQ9BXW6 950 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 CYP4F12Q9HCS2 524 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 ADGRE2Q9UHX3 823 aa6.32□□□□□ -1.4
HERC4-215ENST00000515753 FAM95CA0A1B0GW59 222 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 TIAF1O95411 115 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 EDN3P14138 238 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 USP11P51784 963 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 GSTM4Q03013 218 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 PDE4CQ08493 712 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 PEAR1Q5VY43 1037 aaPredicted RBP6.31□□□□□ -1.4
HERC4-215ENST00000515753 GIMAP7Q8NHV1 300 aa6.31□□□□□ -1.4
HERC4-215ENST00000515753 POLR3DP05423 398 aaPredicted RBP6.3□□□□□ -1.4
HERC4-215ENST00000515753 ESRRAP11474 423 aaPredicted RBP6.3□□□□□ -1.4
HERC4-215ENST00000515753 YBX3P16989 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
HERC4-215ENST00000515753 ADMP35318 185 aa6.3□□□□□ -1.4
HERC4-215ENST00000515753 EXOSC6Q5RKV6 272 aaKnown RBP6.3□□□□□ -1.4
HERC4-215ENST00000515753 ARID3AQ99856 593 aa6.3□□□□□ -1.4
HERC4-215ENST00000515753 SUGCTQ9HAC7 445 aa6.3□□□□□ -1.4
HERC4-215ENST00000515753 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
HERC4-215ENST00000515753 FOSL1P15407 271 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 MSMPQ1L6U9 139 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 ALKBH2Q6NS38 261 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 PHLDB3Q6NSJ2 640 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 PAOXQ6QHF9 649 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 RETREG2Q8NC44 543 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 C2CD4AQ8NCU7 369 aaPredicted RBP6.29□□□□□ -1.4
HERC4-215ENST00000515753 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 BHLHE41Q9C0J9 482 aaPredicted RBP6.29□□□□□ -1.4
HERC4-215ENST00000515753 ANO2Q9NQ90 1003 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms