RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RASGRF1Q13972 1273 aa25.62■■□□□ 1.69
LSM6-207ENST00000515311 PI4K2BQ8TCG2 481 aa25.62■■□□□ 1.69
LSM6-207ENST00000515311 DENND2AQ9ULE3 1009 aa25.62■■□□□ 1.69
LSM6-207ENST00000515311 COL1A1P02452 1464 aaPredicted RBP25.61■■□□□ 1.69
LSM6-207ENST00000515311 MCAMP43121 646 aa25.61■■□□□ 1.69
LSM6-207ENST00000515311 UTRNP46939 3433 aa25.6■■□□□ 1.69
LSM6-207ENST00000515311 FRAT2O75474 233 aaPredicted RBP25.6■■□□□ 1.69
LSM6-207ENST00000515311 SCARF1Q14162 830 aa25.6■■□□□ 1.69
LSM6-207ENST00000515311 TSHZ3Q63HK5 1081 aa25.6■■□□□ 1.69
LSM6-207ENST00000515311 SPATA5Q8NB90 893 aa25.6■■□□□ 1.69
LSM6-207ENST00000515311 HMG20BQ9P0W2 317 aa25.6■■□□□ 1.69
LSM6-207ENST00000515311 IQSEC3Q9UPP2 1182 aaPredicted RBP25.6■■□□□ 1.69
LSM6-207ENST00000515311 FAM205AQ6ZU69 1335 aa25.6■■□□□ 1.69
LSM6-207ENST00000515311 YDJCA8MPS7 323 aa25.59■■□□□ 1.69
LSM6-207ENST00000515311 RNF181Q9P0P0 153 aa25.59■■□□□ 1.69
LSM6-207ENST00000515311 HAUS7Q99871 368 aa25.58■■□□□ 1.69
LSM6-207ENST00000515311 FZD9O00144 591 aa25.57■■□□□ 1.68
LSM6-207ENST00000515311 C9orf131Q5VYM1 1079 aa25.57■■□□□ 1.68
LSM6-207ENST00000515311 SKAP1Q86WV1 359 aa25.57■■□□□ 1.68
LSM6-207ENST00000515311 BOLA2Q9H3K6 86 aa25.57■■□□□ 1.68
LSM6-207ENST00000515311 ZC3H4Q9UPT8 1303 aaKnown RBP25.57■■□□□ 1.68
LSM6-207ENST00000515311 USP17L3A6NCW0 530 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 USP17L4A6NCW7 530 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 STRIP1Q5VSL9 837 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 PI16Q6UXB8 463 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 USP17L1Q7RTZ2 530 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 WDR66Q8TBY9 1149 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 DOCK2Q92608 1830 aa25.56■■□□□ 1.68
LSM6-207ENST00000515311 RGS3P49796 1198 aa25.55■■□□□ 1.68
LSM6-207ENST00000515311 GTF2IP78347 998 aa25.55■■□□□ 1.68
LSM6-207ENST00000515311 TTLL5Q6EMB2 1281 aa25.55■■□□□ 1.68
LSM6-207ENST00000515311 TBC1D22AQ8WUA7 517 aa25.55■■□□□ 1.68
LSM6-207ENST00000515311 SALL1Q9NSC2 1324 aa25.55■■□□□ 1.68
LSM6-207ENST00000515311 ZAP70P43403 619 aa25.54■■□□□ 1.68
LSM6-207ENST00000515311 FKBP1AP62942 108 aaKnown RBP25.54■■□□□ 1.68
LSM6-207ENST00000515311 CHAF1AQ13111 956 aaPredicted RBP25.54■■□□□ 1.68
LSM6-207ENST00000515311 KCNQ5Q9NR82 932 aa25.54■■□□□ 1.68
LSM6-207ENST00000515311 SNRKQ9NRH2 765 aa25.54■■□□□ 1.68
LSM6-207ENST00000515311 EIF6P56537 245 aaKnown RBP25.53■■□□□ 1.68
LSM6-207ENST00000515311 CXCL9Q07325 125 aa25.53■■□□□ 1.68
LSM6-207ENST00000515311 DACT2Q5SW24 774 aa25.53■■□□□ 1.68
LSM6-207ENST00000515311 TTC22Q5TAA0 569 aa25.53■■□□□ 1.68
LSM6-207ENST00000515311 DNAJC2Q99543 621 aaKnown RBP25.53■■□□□ 1.68
LSM6-207ENST00000515311 PAG1Q9NWQ8 432 aa25.53■■□□□ 1.68
LSM6-207ENST00000515311 AK9Q5TCS8 1911 aa25.53■■□□□ 1.68
LSM6-207ENST00000515311 CYP2E1P05181 493 aaPredicted RBP25.52■■□□□ 1.68
LSM6-207ENST00000515311 TNIP1Q15025 636 aa25.52■■□□□ 1.68
LSM6-207ENST00000515311 TTF1Q15361 905 aaPredicted RBP25.52■■□□□ 1.68
LSM6-207ENST00000515311 ZGPATQ8N5A5 531 aaKnown RBP25.52■■□□□ 1.68
LSM6-207ENST00000515311 MYO5AQ9Y4I1 1855 aaKnown RBP25.51■■□□□ 1.67
LSM6-207ENST00000515311 RAD17O75943 681 aa25.51■■□□□ 1.67
LSM6-207ENST00000515311 VIL1P09327 827 aaKnown RBP25.51■■□□□ 1.67
LSM6-207ENST00000515311 CIAPIN1Q6FI81 312 aa25.51■■□□□ 1.67
LSM6-207ENST00000515311 NDUFB9Q9Y6M9 179 aa25.51■■□□□ 1.67
LSM6-207ENST00000515311 MAST2Q6P0Q8 1798 aa25.51■■□□□ 1.67
LSM6-207ENST00000515311 GOLIM4O00461 696 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 PSMD14O00487 310 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 IGSF3O75054 1194 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 MYH7P12883 1935 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 MFSD14BQ5SR56 506 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 MYO3BQ8WXR4 1341 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 FBXW7Q969H0 707 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 JAG2Q9Y219 1238 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 SUGT1Q9Y2Z0 365 aa25.5■■□□□ 1.67
LSM6-207ENST00000515311 ZNF541Q9H0D2 1346 aa25.49■■□□□ 1.67
LSM6-207ENST00000515311 RSBN1LQ6PCB5 846 aaPredicted RBP25.49■■□□□ 1.67
LSM6-207ENST00000515311 GSPT1P15170 499 aaKnown RBP25.48■■□□□ 1.67
LSM6-207ENST00000515311 BMP2KLQ5H9B9 411 aa25.48■■□□□ 1.67
LSM6-207ENST00000515311 SPTY2D1Q68D10 685 aaPredicted RBP25.48■■□□□ 1.67
LSM6-207ENST00000515311 EVI5LQ96CN4 794 aa25.48■■□□□ 1.67
LSM6-207ENST00000515311 ANTXR1Q9H6X2 564 aa25.48■■□□□ 1.67
LSM6-207ENST00000515311 TBC1D9Q6ZT07 1266 aa25.47■■□□□ 1.67
LSM6-207ENST00000515311 GPC2Q8N158 579 aa25.47■■□□□ 1.67
LSM6-207ENST00000515311 CERS5Q8N5B7 392 aa25.47■■□□□ 1.67
LSM6-207ENST00000515311 EDC3Q96F86 508 aaKnown RBP25.47■■□□□ 1.67
LSM6-207ENST00000515311 PIH1D3Q9NQM4 214 aaKnown RBP25.47■■□□□ 1.67
LSM6-207ENST00000515311 ABCF2Q9UG63 623 aa25.47■■□□□ 1.67
LSM6-207ENST00000515311 MAP4K4O95819 1239 aaPredicted RBP25.46■■□□□ 1.67
LSM6-207ENST00000515311 RPS12P25398 132 aaKnown RBP25.46■■□□□ 1.67
LSM6-207ENST00000515311 TICAM2Q86XR7 235 aa25.46■■□□□ 1.67
LSM6-207ENST00000515311 CNTROBQ8N137 903 aa25.46■■□□□ 1.67
LSM6-207ENST00000515311 KBTBD3Q8NAB2 608 aa25.46■■□□□ 1.67
LSM6-207ENST00000515311 AGBL3Q8NEM8 1001 aa25.46■■□□□ 1.67
LSM6-207ENST00000515311 GMLQ99445 158 aa25.46■■□□□ 1.67
LSM6-207ENST00000515311 TRIM6-TRIM34B2RNG4 842 aa25.45■■□□□ 1.66
LSM6-207ENST00000515311 LDHBP07195 334 aaKnown RBP25.45■■□□□ 1.66
LSM6-207ENST00000515311 TMED8Q6PL24 325 aaPredicted RBP25.45■■□□□ 1.66
LSM6-207ENST00000515311 MXD3Q9BW11 206 aa25.45■■□□□ 1.66
LSM6-207ENST00000515311 LRP2BPQ9P2M1 347 aa25.45■■□□□ 1.66
LSM6-207ENST00000515311 SDSP20132 328 aa25.44■■□□□ 1.66
LSM6-207ENST00000515311 PRDX5P30044 214 aa25.44■■□□□ 1.66
LSM6-207ENST00000515311 ERICH6Q7L0X2 663 aa25.44■■□□□ 1.66
LSM6-207ENST00000515311 RFX7Q2KHR2 1363 aa25.44■■□□□ 1.66
LSM6-207ENST00000515311 MAST3O60307 1309 aa25.43■■□□□ 1.66
LSM6-207ENST00000515311 IDH1O75874 414 aaKnown RBP25.43■■□□□ 1.66
LSM6-207ENST00000515311 MAP3K12Q12852 859 aa25.43■■□□□ 1.66
LSM6-207ENST00000515311 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.43■■□□□ 1.66
LSM6-207ENST00000515311 GJA3Q9Y6H8 435 aa25.43■■□□□ 1.66
LSM6-207ENST00000515311 MMP14P50281 582 aa25.42■■□□□ 1.66
LSM6-207ENST00000515311 GRIK5Q16478 980 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms