RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 PCDHAC2Q9Y5I4 1007 aa11.08□□□□□ -0.64
CAST-240ENST00000514055 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
CAST-240ENST00000514055 ZBTB48P10074 688 aaPredicted RBP11.07□□□□□ -0.64
CAST-240ENST00000514055 PLBD2Q8NHP8 589 aa11.07□□□□□ -0.64
CAST-240ENST00000514055 DPF3Q92784 378 aa11.07□□□□□ -0.64
CAST-240ENST00000514055 SHISA4Q96DD7 197 aa11.07□□□□□ -0.64
CAST-240ENST00000514055 ZBED3Q96IU2 234 aaPredicted RBP11.07□□□□□ -0.64
CAST-240ENST00000514055 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
CAST-240ENST00000514055 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
CAST-240ENST00000514055 DDX58O95786 925 aaKnown RBP11.06□□□□□ -0.64
CAST-240ENST00000514055 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 MAP3K11Q16584 847 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 TXNRD3Q86VQ6 643 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
CAST-240ENST00000514055 KIAA0825Q8IV33 1275 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 LRCH3Q96II8 777 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 ARHGAP39Q9C0H5 1083 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 DEFB129Q9H1M3 183 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 XDHP47989 1333 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 AOX1Q06278 1338 aa11.06□□□□□ -0.64
CAST-240ENST00000514055 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
CAST-240ENST00000514055 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
CAST-240ENST00000514055 MTFR1Q15390 333 aa11.05□□□□□ -0.64
CAST-240ENST00000514055 G2E3Q7L622 706 aa11.05□□□□□ -0.64
CAST-240ENST00000514055 RIC3Q7Z5B4 369 aa11.05□□□□□ -0.64
CAST-240ENST00000514055 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
CAST-240ENST00000514055 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
CAST-240ENST00000514055 KLRK1P26718 216 aa11.04□□□□□ -0.64
CAST-240ENST00000514055 FLIIQ13045 1269 aa11.04□□□□□ -0.64
CAST-240ENST00000514055 FKBP5Q13451 457 aaPredicted RBP11.04□□□□□ -0.64
CAST-240ENST00000514055 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
CAST-240ENST00000514055 STRIP1Q5VSL9 837 aa11.04□□□□□ -0.64
CAST-240ENST00000514055 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
CAST-240ENST00000514055 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
CAST-240ENST00000514055 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
CAST-240ENST00000514055 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 CLRN2A0PK11 232 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 USP2O75604 605 aaPredicted RBP11.03□□□□□ -0.64
CAST-240ENST00000514055 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 CCDC152Q4G0S7 254 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 OTUD7BQ6GQQ9 843 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 ANKRD18AQ8IVF6 992 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
CAST-240ENST00000514055 BRI3BPQ8WY22 251 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 SSH1Q8WYL5 1049 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 ELP3Q9H9T3 547 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 SMC4Q9NTJ3 1288 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 MAP3K2Q9Y2U5 619 aa11.03□□□□□ -0.64
CAST-240ENST00000514055 PI4KAP2A4QPH2 592 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
CAST-240ENST00000514055 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
CAST-240ENST00000514055 TRIM28Q13263 835 aaKnown RBP11.02□□□□□ -0.65
CAST-240ENST00000514055 KSR2Q6VAB6 950 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 FAM43AQ8N2R8 423 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
CAST-240ENST00000514055 PI4KAP1Q8N8J0 262 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 MYD88Q99836 296 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 MYO3BQ8WXR4 1341 aa11.02□□□□□ -0.65
CAST-240ENST00000514055 LAMB1P07942 1786 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 CCT4P50991 539 aaKnown RBP11.01□□□□□ -0.65
CAST-240ENST00000514055 GTF2IP78347 998 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 TAF1CQ15572 869 aaPredicted RBP11.01□□□□□ -0.65
CAST-240ENST00000514055 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 CERS5Q8N5B7 392 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 METTL22Q9BUU2 404 aaPredicted RBP11.01□□□□□ -0.65
CAST-240ENST00000514055 COA1Q9GZY4 146 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 UNC80Q8N2C7 3258 aa11.01□□□□□ -0.65
CAST-240ENST00000514055 CCL15-CCL14A0A0B4J2E2 113 aa11□□□□□ -0.65
CAST-240ENST00000514055 F8W031 263 aaPredicted RBP11□□□□□ -0.65
CAST-240ENST00000514055 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
CAST-240ENST00000514055 PDE8AO60658 829 aa11□□□□□ -0.65
CAST-240ENST00000514055 CTGFP29279 349 aa11□□□□□ -0.65
CAST-240ENST00000514055 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
CAST-240ENST00000514055 RARSP54136 660 aaKnown RBP11□□□□□ -0.65
CAST-240ENST00000514055 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
CAST-240ENST00000514055 DLGAP5Q15398 846 aa11□□□□□ -0.65
CAST-240ENST00000514055 CCL15Q16663 113 aa11□□□□□ -0.65
CAST-240ENST00000514055 Q7L0L9 218 aa11□□□□□ -0.65
CAST-240ENST00000514055 DNAAF4Q8WXU2 420 aa11□□□□□ -0.65
CAST-240ENST00000514055 VEZTQ9HBM0 779 aa11□□□□□ -0.65
CAST-240ENST00000514055 ZFYVE28Q9HCC9 887 aa11□□□□□ -0.65
CAST-240ENST00000514055 PTPRCP08575 1304 aa11□□□□□ -0.65
CAST-240ENST00000514055 VCANP13611 3396 aa11□□□□□ -0.65
CAST-240ENST00000514055 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
CAST-240ENST00000514055 MYH3P11055 1940 aa10.99□□□□□ -0.65
CAST-240ENST00000514055 PCCAP05165 728 aaPredicted RBP10.99□□□□□ -0.65
CAST-240ENST00000514055 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
CAST-240ENST00000514055 PRMT6Q96LA8 375 aaPredicted RBP10.99□□□□□ -0.65
CAST-240ENST00000514055 COL25A1Q9BXS0 654 aaPredicted RBP10.99□□□□□ -0.65
CAST-240ENST00000514055 STAP2Q9UGK3 403 aa10.99□□□□□ -0.65
CAST-240ENST00000514055 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
CAST-240ENST00000514055 SPTBN5Q9NRC6 3674 aaKnown RBP10.98□□□□□ -0.65
CAST-240ENST00000514055 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms