RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 FOXD4L6Q3SYB3 417 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 FOXD4L3Q6VB84 417 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 SLC7A3Q8WY07 619 aa10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 KLHDC7BQ96G42 594 aa10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 AKTIPQ9H8T0 292 aa10.85□□□□□ -0.67
TRAPPC11-210ENST00000513600 F8W735 103 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 NOS3P29474 1203 aa10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 IREB2P48200 963 aaKnown RBP10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 C19orf57Q0VDD7 668 aa10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 NLRP2Q9NX02 1062 aa10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 TRAK1Q9UPV9 953 aa10.84□□□□□ -0.67
TRAPPC11-210ENST00000513600 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 SOX1O00570 391 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 EIF4EBP3O60516 100 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 GRIA4P48058 902 aa10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 SOX17Q9H6I2 414 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 KCNK4Q9NYG8 393 aa10.83□□□□□ -0.68
TRAPPC11-210ENST00000513600 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 FMR1Q06787 632 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 SPRED3Q2MJR0 410 aa10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 PRPF40BQ6NWY9 871 aaKnown RBP10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 EPS8L3Q8TE67 593 aaKnown RBP10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 CLEC4MQ9H2X3 399 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC11-210ENST00000513600 DUOXA2Q1HG44 320 aa10.81□□□□□ -0.68
TRAPPC11-210ENST00000513600 ACAD11Q709F0 780 aa10.81□□□□□ -0.68
TRAPPC11-210ENST00000513600 PPP4R2Q9NY27 417 aa10.81□□□□□ -0.68
TRAPPC11-210ENST00000513600 DDX3YO15523 660 aaKnown RBP10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 FURINP09958 794 aa10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 ITPKAP23677 461 aa10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 MAPK8P45983 427 aa10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 PTPN12Q05209 780 aaKnown RBP10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 PCDH1Q08174 1060 aa10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 SSBP4Q9BWG4 385 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC11-210ENST00000513600 ADAM11O75078 769 aa10.79□□□□□ -0.68
TRAPPC11-210ENST00000513600 ALX3O95076 343 aa10.79□□□□□ -0.68
TRAPPC11-210ENST00000513600 WISP1O95388 367 aa10.79□□□□□ -0.68
TRAPPC11-210ENST00000513600 GRM2Q14416 872 aa10.79□□□□□ -0.68
TRAPPC11-210ENST00000513600 HGSNATQ68CP4 663 aa10.79□□□□□ -0.68
TRAPPC11-210ENST00000513600 FBF1Q8TES7 1133 aa10.79□□□□□ -0.68
TRAPPC11-210ENST00000513600 TMEM238LA0A1B0GVL6 79 aa10.78□□□□□ -0.68
TRAPPC11-210ENST00000513600 NLRP12P59046 1061 aa10.78□□□□□ -0.68
TRAPPC11-210ENST00000513600 Q6ZS46 218 aa10.78□□□□□ -0.68
TRAPPC11-210ENST00000513600 TP53INP1Q96A56 240 aa10.78□□□□□ -0.68
TRAPPC11-210ENST00000513600 ZNF576Q9H609 170 aa10.78□□□□□ -0.68
TRAPPC11-210ENST00000513600 ABCB6Q9NP58 842 aa10.78□□□□□ -0.68
TRAPPC11-210ENST00000513600 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 ALG1LQ6GMV1 187 aa10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 KIAA1211Q6ZU35 1233 aa10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 DZIP1LQ8IYY4 767 aaKnown RBP10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 AGGF1Q8N302 714 aaeCLIP10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 DDX54Q8TDD1 881 aaKnown RBP10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 UBASH3BQ8TF42 649 aa10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 MEGF10Q96KG7 1140 aa10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 ZFYVE1Q9HBF4 777 aa10.77□□□□□ -0.69
TRAPPC11-210ENST00000513600 GSTM4Q03013 218 aa10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 RSPO4Q2I0M5 234 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 ZNF423Q2M1K9 1284 aa10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 RPS26P11Q5JNZ5 115 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 NKAPLQ5M9Q1 402 aa10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 PI16Q6UXB8 463 aa10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 GLIS3Q8NEA6 775 aa10.76□□□□□ -0.69
TRAPPC11-210ENST00000513600 ADAM23O75077 832 aa10.75□□□□□ -0.69
TRAPPC11-210ENST00000513600 H2AFB1P0C5Y9 115 aa10.75□□□□□ -0.69
TRAPPC11-210ENST00000513600 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
TRAPPC11-210ENST00000513600 GLB1P16278 677 aa10.75□□□□□ -0.69
TRAPPC11-210ENST00000513600 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
TRAPPC11-210ENST00000513600 CEP41Q9BYV8 373 aa10.75□□□□□ -0.69
TRAPPC11-210ENST00000513600 B3GALT4O96024 378 aa10.74□□□□□ -0.69
TRAPPC11-210ENST00000513600 XRCC5P13010 732 aaKnown RBP10.74□□□□□ -0.69
TRAPPC11-210ENST00000513600 COL19A1Q14993 1142 aa10.74□□□□□ -0.69
TRAPPC11-210ENST00000513600 RNF208Q9H0X6 261 aa10.74□□□□□ -0.69
TRAPPC11-210ENST00000513600 GZF1Q9H116 711 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC11-210ENST00000513600 P4HBP07237 508 aaKnown RBP10.73□□□□□ -0.69
TRAPPC11-210ENST00000513600 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
TRAPPC11-210ENST00000513600 SEMA6BQ9H3T3 888 aa10.73□□□□□ -0.69
TRAPPC11-210ENST00000513600 MEGF11A6BM72 1044 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 ANKRD33BA6NCL7 494 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 GIPC1O14908 333 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 FCGRTP55899 365 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 USP26Q9BXU7 913 aa10.72□□□□□ -0.69
TRAPPC11-210ENST00000513600 LOC100289279A0A1B0GTE1 492 aa10.71□□□□□ -0.69
TRAPPC11-210ENST00000513600 DYRK3O43781 588 aa10.71□□□□□ -0.69
TRAPPC11-210ENST00000513600 CYP11A1P05108 521 aa10.71□□□□□ -0.69
TRAPPC11-210ENST00000513600 NXPE4Q6UWF7 544 aa10.71□□□□□ -0.69
TRAPPC11-210ENST00000513600 SRCIN1Q9C0H9 1055 aa10.71□□□□□ -0.69
TRAPPC11-210ENST00000513600 WWC3Q9ULE0 1092 aa10.71□□□□□ -0.69
TRAPPC11-210ENST00000513600 LDHBP07195 334 aaKnown RBP10.7□□□□□ -0.7
TRAPPC11-210ENST00000513600 FGD1P98174 961 aa10.7□□□□□ -0.7
TRAPPC11-210ENST00000513600 ANKRD34AQ69YU3 496 aa10.7□□□□□ -0.7
TRAPPC11-210ENST00000513600 UBL7Q96S82 380 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC11-210ENST00000513600 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
TRAPPC11-210ENST00000513600 SPG7Q9UQ90 795 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms