RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ARHGEF6Q15052 776 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 TAF1CQ15572 869 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-227ENST00000513452 ANKRD13AQ8IZ07 590 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 TTLL11Q8NHH1 800 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-227ENST00000513452 ELP3Q9H9T3 547 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
CLDND1-227ENST00000513452 ECM29Q5VYK3 1845 aa13.55□□□□□ -0.24
CLDND1-227ENST00000513452 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-227ENST00000513452 MYO1BO43795 1136 aa13.55□□□□□ -0.24
CLDND1-227ENST00000513452 USP2O75604 605 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-227ENST00000513452 CERS5Q8N5B7 392 aa13.55□□□□□ -0.24
CLDND1-227ENST00000513452 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
CLDND1-227ENST00000513452 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
CLDND1-227ENST00000513452 AOX1Q06278 1338 aa13.55□□□□□ -0.24
CLDND1-227ENST00000513452 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
CLDND1-227ENST00000513452 KCNJ4P48050 445 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 ZFYVE28Q9HCC9 887 aa13.54□□□□□ -0.24
CLDND1-227ENST00000513452 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
CLDND1-227ENST00000513452 ZSWIM8A7E2V4 1837 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 MYH3P11055 1940 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 CCL15-CCL14A0A0B4J2E2 113 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
CLDND1-227ENST00000513452 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
CLDND1-227ENST00000513452 RASA3Q14644 834 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 CCL15Q16663 113 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 DPF3Q92784 378 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 SHISA4Q96DD7 197 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 CD209Q9NNX6 404 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 MAP3K2Q9Y2U5 619 aa13.53□□□□□ -0.24
CLDND1-227ENST00000513452 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
CLDND1-227ENST00000513452 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLDND1-227ENST00000513452 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
CLDND1-227ENST00000513452 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
CLDND1-227ENST00000513452 GTF2A2P52657 109 aa13.51□□□□□ -0.25
CLDND1-227ENST00000513452 KIF22Q14807 665 aa13.51□□□□□ -0.25
CLDND1-227ENST00000513452 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
CLDND1-227ENST00000513452 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
CLDND1-227ENST00000513452 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
CLDND1-227ENST00000513452 SNAP23O00161 211 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
CLDND1-227ENST00000513452 ITGA6P23229 1130 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
CLDND1-227ENST00000513452 CHRNDQ07001 517 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 TNFAIP1Q13829 316 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 VGLL4Q14135 290 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 CWF19L2Q2TBE0 894 aaKnown RBP13.5□□□□□ -0.25
CLDND1-227ENST00000513452 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.5□□□□□ -0.25
CLDND1-227ENST00000513452 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 RUNDC1Q96C34 613 aa13.5□□□□□ -0.25
CLDND1-227ENST00000513452 CUL9Q8IWT3 2517 aa13.49□□□□□ -0.25
CLDND1-227ENST00000513452 NEXNQ0ZGT2 675 aa13.49□□□□□ -0.25
CLDND1-227ENST00000513452 MTFR1Q15390 333 aa13.49□□□□□ -0.25
CLDND1-227ENST00000513452 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 PI4KAP2A4QPH2 592 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 TLR2O60603 784 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 TAF5LO75529 589 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 WDHD1O75717 1129 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-227ENST00000513452 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 PI4KAP1Q8N8J0 262 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-227ENST00000513452 HTATIP2Q9BUP3 242 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-227ENST00000513452 CSADQ9Y600 493 aa13.48□□□□□ -0.25
CLDND1-227ENST00000513452 IL1R1P14778 569 aa13.47□□□□□ -0.25
CLDND1-227ENST00000513452 WDR43Q15061 677 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLDND1-227ENST00000513452 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
CLDND1-227ENST00000513452 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
CLDND1-227ENST00000513452 TEPSINQ96N21 525 aa13.47□□□□□ -0.25
CLDND1-227ENST00000513452 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
CLDND1-227ENST00000513452 TCP10L2B9ZVM9 353 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 H7C1W4 665 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 SOX1O00570 391 aaPredicted RBP13.46□□□□□ -0.25
CLDND1-227ENST00000513452 GNRH1P01148 92 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 CETPP11597 493 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 PRMT2P55345 433 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 FKBP1AP62942 108 aaKnown RBP13.46□□□□□ -0.25
CLDND1-227ENST00000513452 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLDND1-227ENST00000513452 NKX2-3Q8TAU0 364 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.25
CLDND1-227ENST00000513452 TDRD3Q9H7E2 651 aaKnown RBP13.46□□□□□ -0.25
CLDND1-227ENST00000513452 A0A1B0GUL6 1792 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 ARAP2Q8WZ64 1704 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms