RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 V9GY48 417 aaPredicted RBP6.78□□□□□ -1.32
HTT-211ENST00000513326 ADAMTS7Q9UKP4 1686 aa6.77□□□□□ -1.32
HTT-211ENST00000513326 CGNL1Q0VF96 1302 aa6.77□□□□□ -1.32
HTT-211ENST00000513326 LBX1P52954 281 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 GTF2IP78347 998 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 TRIM26Q12899 539 aaPredicted RBP6.77□□□□□ -1.33
HTT-211ENST00000513326 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 ZNF697Q5TEC3 545 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 ANKMY2Q8IV38 441 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 ABHD8Q96I13 439 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 GGNBP2Q9H3C7 697 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 PARP3Q9Y6F1 533 aa6.77□□□□□ -1.33
HTT-211ENST00000513326 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 GLTPD2A6NH11 291 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 NFKBIEO00221 500 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 BRD1O95696 1058 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 TMEM164Q5U3C3 297 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 SIX5Q8N196 739 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 STK32AQ8WU08 396 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
HTT-211ENST00000513326 PRKD2Q9BZL6 878 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 TERF2IPQ9NYB0 399 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 TMOD3Q9NYL9 352 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 RTCBQ9Y3I0 505 aaKnown RBP6.76□□□□□ -1.33
HTT-211ENST00000513326 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
HTT-211ENST00000513326 PCDHGA11Q9Y5H2 935 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 CNTNAP1P78357 1384 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 CARMIL3Q8ND23 1372 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 CCDC88AQ3V6T2 1871 aa6.76□□□□□ -1.33
HTT-211ENST00000513326 INSRP06213 1382 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 POLRMTO00411 1230 aaKnown RBP6.75□□□□□ -1.33
HTT-211ENST00000513326 FYB1O15117 783 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 ZBTB7BO15156 539 aaPredicted RBP6.75□□□□□ -1.33
HTT-211ENST00000513326 HSPA8P11142 646 aaKnown RBP6.75□□□□□ -1.33
HTT-211ENST00000513326 VEGFAP15692 232 aaPredicted RBP6.75□□□□□ -1.33
HTT-211ENST00000513326 VEGFBP49765 207 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 ERVK-9P63128 1117 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 PRDM10Q9NQV6 1147 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 SMG6Q86US8 1419 aaKnown RBP6.75□□□□□ -1.33
HTT-211ENST00000513326 CNTNAP4Q9C0A0 1308 aa6.75□□□□□ -1.33
HTT-211ENST00000513326 VIRMAQ69YN4 1812 aaKnown RBP6.74□□□□□ -1.33
HTT-211ENST00000513326 TJP1Q07157 1748 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 PATL2C9JE40 543 aaKnown RBP6.74□□□□□ -1.33
HTT-211ENST00000513326 RPS6KA4O75676 772 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 PHKG2P15735 406 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 LMNB1P20700 586 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 RFC4P35249 363 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 SCTRP47872 440 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 DPYDQ12882 1025 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 FOXC1Q12948 553 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 CCDC102BQ68D86 513 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 B4GALNT3Q6L9W6 998 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 AEBP1Q8IUX7 1158 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 PKD2L1Q9P0L9 805 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 DLEC1Q9Y238 1755 aa6.74□□□□□ -1.33
HTT-211ENST00000513326 USP42Q9H9J4 1324 aaKnown RBP6.74□□□□□ -1.33
HTT-211ENST00000513326 AFDNP55196 1824 aaKnown RBP6.73□□□□□ -1.33
HTT-211ENST00000513326 FLT4P35916 1363 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 DKK1O94907 266 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 ALDH1A1P00352 501 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 CTCFP49711 727 aaPredicted RBP6.73□□□□□ -1.33
HTT-211ENST00000513326 SEC13P55735 322 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 SWI5Q1ZZU3 235 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 PPP1R26Q5T8A7 1209 aaPredicted RBP6.73□□□□□ -1.33
HTT-211ENST00000513326 SNIP1Q8TAD8 396 aaKnown RBP6.73□□□□□ -1.33
HTT-211ENST00000513326 TESK2Q96S53 571 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 TMPRSS4Q9NRS4 437 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 KIAA1024Q9UPX6 916 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 ZNF831Q5JPB2 1677 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 PASKQ96RG2 1323 aa6.73□□□□□ -1.33
HTT-211ENST00000513326 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 CCDC85CA6NKD9 419 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 NR3C2P08235 984 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 CRKLP46109 303 aaKnown RBP6.72□□□□□ -1.33
HTT-211ENST00000513326 KCNA1Q09470 495 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 NEUROD1Q13562 356 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 CARD11Q9BXL7 1154 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 CYLDQ9NQC7 956 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 WASF2Q9Y6W5 498 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 COL11A2P13942 1736 aaPredicted RBP6.72□□□□□ -1.33
HTT-211ENST00000513326 NRXN2Q9P2S2 1712 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 ANKRD26Q9UPS8 1709 aa6.72□□□□□ -1.33
HTT-211ENST00000513326 LILRA1O75019 489 aa6.71□□□□□ -1.34
HTT-211ENST00000513326 PTCD1O75127 700 aaKnown RBP6.71□□□□□ -1.34
HTT-211ENST00000513326 DDNO94850 711 aaPredicted RBP6.71□□□□□ -1.34
HTT-211ENST00000513326 TM4SF1P30408 202 aa6.71□□□□□ -1.34
HTT-211ENST00000513326 MLLT1Q03111 559 aaPredicted RBP6.71□□□□□ -1.34
HTT-211ENST00000513326 NFIXQ14938 502 aa6.71□□□□□ -1.34
HTT-211ENST00000513326 INTS5Q6P9B9 1019 aaKnown RBP6.71□□□□□ -1.34
HTT-211ENST00000513326 CLP1Q92989 425 aaKnown RBP6.71□□□□□ -1.34
HTT-211ENST00000513326 AIDAQ96BJ3 306 aa6.71□□□□□ -1.34
HTT-211ENST00000513326 OSBPL3Q9H4L5 887 aa6.71□□□□□ -1.34
HTT-211ENST00000513326 SPG7Q9UQ90 795 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms