RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 GAS6Q14393 721 aa9.37□□□□□ -0.91
RFC1-215ENST00000512881 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
RFC1-215ENST00000512881 COL23A1Q86Y22 540 aaPredicted RBP9.37□□□□□ -0.91
RFC1-215ENST00000512881 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
RFC1-215ENST00000512881 IFNL2Q8IZJ0 200 aa9.37□□□□□ -0.91
RFC1-215ENST00000512881 NCAPD2Q15021 1401 aa9.37□□□□□ -0.91
RFC1-215ENST00000512881 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
RFC1-215ENST00000512881 BTAF1O14981 1849 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 SLURP2P0DP57 97 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 PHKG2P15735 406 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 SOX11P35716 441 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 PALLDQ8WX93 1383 aa9.36□□□□□ -0.91
RFC1-215ENST00000512881 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 CENPCQ03188 943 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 USP4Q13107 963 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
RFC1-215ENST00000512881 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 PLPP7Q8NBV4 271 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 FLAD1Q8NFF5 587 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 TMOD3Q9NYL9 352 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 MYOM1P52179 1685 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
RFC1-215ENST00000512881 KIF7Q2M1P5 1343 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 LOC102724428A0A0B4J2F2 783 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 PIK3CDO00329 1044 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 SIK1P57059 783 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 DBN1Q16643 649 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
RFC1-215ENST00000512881 GMCL1Q96IK5 515 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 ASAP1Q9ULH1 1129 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 RGPD2P0DJD1 1756 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
RFC1-215ENST00000512881 KIF20BQ96Q89 1820 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 ERVV-2B6SEH9 535 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 IL13P35225 146 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 SCNN1DP51172 638 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 GPR162Q16538 588 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 AEBP1Q8IUX7 1158 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
RFC1-215ENST00000512881 ATG3Q9NT62 314 aa9.33□□□□□ -0.92
RFC1-215ENST00000512881 GOLGB1Q14789 3259 aaKnown RBP9.33□□□□□ -0.92
RFC1-215ENST00000512881 GPR25O00155 361 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 THBS1P07996 1170 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
RFC1-215ENST00000512881 SULT6B1Q6IMI4 303 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 ZNF530Q6P9A1 599 aaPredicted RBP9.32□□□□□ -0.92
RFC1-215ENST00000512881 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 AMIGO3Q86WK7 504 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 LINC00116Q8NCU8 138 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
RFC1-215ENST00000512881 TIMMDC1Q9NPL8 285 aa9.32□□□□□ -0.92
RFC1-215ENST00000512881 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 MTHFSP49914 203 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 ITPK1Q13572 414 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 NLGN2Q8NFZ4 835 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 ALG2Q9H553 416 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 PLEKHG2Q9H7P9 1386 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
RFC1-215ENST00000512881 SSFA2P28290 1259 aa9.3□□□□□ -0.92
RFC1-215ENST00000512881 CABP4P57796 275 aa9.3□□□□□ -0.92
RFC1-215ENST00000512881 SRSF11Q05519 484 aaKnown RBP9.3□□□□□ -0.92
RFC1-215ENST00000512881 TLR1Q15399 786 aa9.3□□□□□ -0.92
RFC1-215ENST00000512881 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
RFC1-215ENST00000512881 CC2D1BQ5T0F9 858 aaKnown RBP9.3□□□□□ -0.92
RFC1-215ENST00000512881 SVOPQ8N4V2 548 aa9.3□□□□□ -0.92
RFC1-215ENST00000512881 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
RFC1-215ENST00000512881 H7C1W4 665 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 F11P03951 625 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 PHKA2P46019 1235 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 GDF10P55107 478 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 FLIIQ13045 1269 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 C1orf141Q5JVX7 400 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 CD2APQ9Y5K6 639 aa9.29□□□□□ -0.92
RFC1-215ENST00000512881 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 NFATC2IPQ8NCF5 419 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 ADAMTS19Q8TE59 1207 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 RHBDD1Q8TEB9 315 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
RFC1-215ENST00000512881 GPAMQ9HCL2 828 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 MBIPQ9NS73 344 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 LY75O60449 1722 aa9.28□□□□□ -0.92
RFC1-215ENST00000512881 KDRP35968 1356 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
RFC1-215ENST00000512881 POM121CA8CG34 1229 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 GRIN3BO60391 1043 aa9.27□□□□□ -0.93
RFC1-215ENST00000512881 DIAPH1O60610 1272 aaKnown RBP9.27□□□□□ -0.93
RFC1-215ENST00000512881 ARHGEF15O94989 841 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms