RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 F8W031 263 aaPredicted RBP19.72■□□□□ 0.75
DDX41-214ENST00000512334 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 FMR1Q06787 632 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDX41-214ENST00000512334 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
DDX41-214ENST00000512334 G3BP1Q13283 466 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDX41-214ENST00000512334 SCARF1Q14162 830 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 CDC37L1Q7L3B6 337 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 CERS5Q8N5B7 392 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 CREBZFQ9NS37 354 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 GGA3Q9NZ52 723 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 DDX19BQ9UMR2 479 aa19.72■□□□□ 0.75
DDX41-214ENST00000512334 TMEM88BA6NKF7 163 aa19.71■□□□□ 0.75
DDX41-214ENST00000512334 FKBP1AP62942 108 aaKnown RBP19.71■□□□□ 0.75
DDX41-214ENST00000512334 FAM205AQ6ZU69 1335 aa19.71■□□□□ 0.75
DDX41-214ENST00000512334 MMP14P50281 582 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 TFCP2Q12800 502 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 OS9Q13438 667 aaPredicted RBP19.7■□□□□ 0.74
DDX41-214ENST00000512334 POLA2Q14181 598 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 MFSD14BQ5SR56 506 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 KRT26Q7Z3Y9 468 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 USP48Q86UV5 1035 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 SSH3Q8TE77 659 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 AKAP2Q9Y2D5 859 aa19.7■□□□□ 0.74
DDX41-214ENST00000512334 ASTN2O75129 1339 aaPredicted RBP19.7■□□□□ 0.74
DDX41-214ENST00000512334 PDE3AQ14432 1141 aa19.69■□□□□ 0.74
DDX41-214ENST00000512334 ANGEL2Q5VTE6 544 aaKnown RBP19.69■□□□□ 0.74
DDX41-214ENST00000512334 ZNF408Q9H9D4 720 aa19.69■□□□□ 0.74
DDX41-214ENST00000512334 CEP350Q5VT06 3117 aa19.69■□□□□ 0.74
DDX41-214ENST00000512334 SURF6O75683 361 aaKnown RBP19.68■□□□□ 0.74
DDX41-214ENST00000512334 TIMM10P62072 90 aa19.68■□□□□ 0.74
DDX41-214ENST00000512334 NBPF9Q3BBW0 867 aa19.68■□□□□ 0.74
DDX41-214ENST00000512334 CEP85Q6P2H3 762 aa19.68■□□□□ 0.74
DDX41-214ENST00000512334 SULF1Q8IWU6 871 aa19.68■□□□□ 0.74
DDX41-214ENST00000512334 CHMP4BQ9H444 224 aaKnown RBP19.68■□□□□ 0.74
DDX41-214ENST00000512334 POLR2AP24928 1970 aaKnown RBP19.68■□□□□ 0.74
DDX41-214ENST00000512334 TRPM7Q96QT4 1865 aa19.67■□□□□ 0.74
DDX41-214ENST00000512334 A0A1B0GUL7 405 aa19.67■□□□□ 0.74
DDX41-214ENST00000512334 ADM5C9JUS6 153 aa19.67■□□□□ 0.74
DDX41-214ENST00000512334 WNT10BO00744 389 aa19.67■□□□□ 0.74
DDX41-214ENST00000512334 CELF2O95319 508 aaKnown RBP19.67■□□□□ 0.74
DDX41-214ENST00000512334 ADORA1P30542 326 aa19.67■□□□□ 0.74
DDX41-214ENST00000512334 DNAJC5GQ8N7S2 189 aa19.67■□□□□ 0.74
DDX41-214ENST00000512334 GNL3LQ9NVN8 582 aaKnown RBP19.67■□□□□ 0.74
DDX41-214ENST00000512334 ABT1Q9ULW3 272 aaKnown RBP19.67■□□□□ 0.74
DDX41-214ENST00000512334 RBM5P52756 815 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDX41-214ENST00000512334 DLGAP5Q15398 846 aa19.66■□□□□ 0.74
DDX41-214ENST00000512334 DLK2Q6UY11 383 aa19.66■□□□□ 0.74
DDX41-214ENST00000512334 TBC1D22AQ8WUA7 517 aa19.66■□□□□ 0.74
DDX41-214ENST00000512334 KLRG1Q96E93 195 aa19.66■□□□□ 0.74
DDX41-214ENST00000512334 NEUROD6Q96NK8 337 aa19.66■□□□□ 0.74
DDX41-214ENST00000512334 TTF2Q9UNY4 1162 aaKnown RBP19.66■□□□□ 0.74
DDX41-214ENST00000512334 MYH13Q9UKX3 1938 aa19.66■□□□□ 0.74
DDX41-214ENST00000512334 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
DDX41-214ENST00000512334 PHKA1P46020 1223 aa19.65■□□□□ 0.74
DDX41-214ENST00000512334 CFAP100Q494V2 611 aa19.65■□□□□ 0.74
DDX41-214ENST00000512334 ZBTB40Q9NUA8 1239 aa19.65■□□□□ 0.74
DDX41-214ENST00000512334 MKRN1Q9UHC7 482 aaKnown RBP19.65■□□□□ 0.74
DDX41-214ENST00000512334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.65■□□□□ 0.74
DDX41-214ENST00000512334 CST9Q5W186 159 aa19.64■□□□□ 0.73
DDX41-214ENST00000512334 CCDC102BQ68D86 513 aa19.64■□□□□ 0.73
DDX41-214ENST00000512334 XAGE2Q96GT9 111 aa19.64■□□□□ 0.73
DDX41-214ENST00000512334 SCAF8Q9UPN6 1271 aaKnown RBP19.64■□□□□ 0.73
DDX41-214ENST00000512334 PITPNM2Q9BZ72 1349 aa19.64■□□□□ 0.73
DDX41-214ENST00000512334 GORABQ5T7V8 394 aa19.63■□□□□ 0.73
DDX41-214ENST00000512334 WDR66Q8TBY9 1149 aa19.63■□□□□ 0.73
DDX41-214ENST00000512334 PCDHAC2Q9Y5I4 1007 aa19.63■□□□□ 0.73
DDX41-214ENST00000512334 MYO1BO43795 1136 aa19.62■□□□□ 0.73
DDX41-214ENST00000512334 GRIK5Q16478 980 aa19.62■□□□□ 0.73
DDX41-214ENST00000512334 RPAP2Q8IXW5 612 aaPredicted RBP19.62■□□□□ 0.73
DDX41-214ENST00000512334 ZBED3Q96IU2 234 aaPredicted RBP19.62■□□□□ 0.73
DDX41-214ENST00000512334 DENND2AQ9ULE3 1009 aa19.62■□□□□ 0.73
DDX41-214ENST00000512334 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
DDX41-214ENST00000512334 COL1A1P02452 1464 aaPredicted RBP19.61■□□□□ 0.73
DDX41-214ENST00000512334 SPDYE2BA6NHP3 402 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 SEMA3EO15041 775 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 HMMRO75330 724 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 SPDYE6P0CI01 402 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 RRP1P56182 461 aaKnown RBP19.61■□□□□ 0.73
DDX41-214ENST00000512334 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
DDX41-214ENST00000512334 MTMR14Q8NCE2 650 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 SERPINA10Q9UK55 444 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 EXOC6BQ9Y2D4 811 aa19.61■□□□□ 0.73
DDX41-214ENST00000512334 CNTNAP1P78357 1384 aa19.6■□□□□ 0.73
DDX41-214ENST00000512334 CLRN2A0PK11 232 aa19.6■□□□□ 0.73
DDX41-214ENST00000512334 CRKP46108 304 aa19.6■□□□□ 0.73
DDX41-214ENST00000512334 DEFB115Q30KQ5 88 aa19.6■□□□□ 0.73
DDX41-214ENST00000512334 APOBEC3FQ8IUX4 373 aaKnown RBP19.6■□□□□ 0.73
DDX41-214ENST00000512334 PRMT6Q96LA8 375 aaPredicted RBP19.6■□□□□ 0.73
DDX41-214ENST00000512334 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
DDX41-214ENST00000512334 MAST3O60307 1309 aa19.59■□□□□ 0.73
DDX41-214ENST00000512334 TNNI3KQ59H18 835 aa19.59■□□□□ 0.73
DDX41-214ENST00000512334 VEZTQ9HBM0 779 aa19.59■□□□□ 0.73
DDX41-214ENST00000512334 GPR108Q9NPR9 543 aa19.59■□□□□ 0.73
DDX41-214ENST00000512334 SUGT1Q9Y2Z0 365 aa19.59■□□□□ 0.73
DDX41-214ENST00000512334 FPGT-TNNI3KV9GXZ4 949 aa19.59■□□□□ 0.73
DDX41-214ENST00000512334 ECM29Q5VYK3 1845 aa19.58■□□□□ 0.73
DDX41-214ENST00000512334 RASSF10A6NK89 507 aa19.58■□□□□ 0.72
DDX41-214ENST00000512334 RASGRF1Q13972 1273 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms