RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 C4AP0C0L4 1744 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 SASH1O94885 1247 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 SDSP20132 328 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 ITGA6P23229 1130 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 SSFA2P28290 1259 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 IGHMBP2P38935 993 aaKnown RBP9.83□□□□□ -0.84
HTT-209ENST00000512068 TFCP2Q12800 502 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 SF3B2Q13435 895 aaKnown RBP9.83□□□□□ -0.84
HTT-209ENST00000512068 TXNRD1Q16881 649 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 TNNI3KQ59H18 835 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 GORABQ5T7V8 394 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 TSHZ3Q63HK5 1081 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 ADGRD1Q6QNK2 874 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 TBC1D9Q6ZT07 1266 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 ERICH6Q7L0X2 663 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 NBPF5PQ86XG9 351 aaPredicted RBP9.83□□□□□ -0.84
HTT-209ENST00000512068 MPHOSPH8Q99549 860 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 CCDC8Q9H0W5 538 aaPredicted RBP9.83□□□□□ -0.84
HTT-209ENST00000512068 TMEM134Q9H6X4 195 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 FPGT-TNNI3KV9GXZ4 949 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
HTT-209ENST00000512068 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 USP42Q9H9J4 1324 aaKnown RBP9.82□□□□□ -0.84
HTT-209ENST00000512068 REC8O95072 547 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 NTSR2O95665 410 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 CSF1RP07333 972 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 HCLS1P14317 486 aaPredicted RBP9.82□□□□□ -0.84
HTT-209ENST00000512068 METTL24Q5JXM2 366 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 TPTE2Q6XPS3 522 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 LDHAL6AQ6ZMR3 332 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 LAPTM4BQ86VI4 370 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 TTLL11Q8NHH1 800 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 NEUROD6Q96NK8 337 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 CDC5LQ99459 802 aaKnown RBP9.82□□□□□ -0.84
HTT-209ENST00000512068 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 GPR108Q9NPR9 543 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
HTT-209ENST00000512068 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
HTT-209ENST00000512068 TUBGCP6Q96RT7 1819 aa9.82□□□□□ -0.84
HTT-209ENST00000512068 DDX60Q8IY21 1712 aaKnown RBP9.82□□□□□ -0.84
HTT-209ENST00000512068 RGPD3A6NKT7 1758 aaPredicted RBP9.81□□□□□ -0.84
HTT-209ENST00000512068 RGPD4Q7Z3J3 1758 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 CARMIL3Q8ND23 1372 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 HIP1O00291 1037 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 PLSCR1O15162 318 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 TBC1D9BQ66K14 1250 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 FLAD1Q8NFF5 587 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 RUFY2Q8WXA3 655 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 EAF2Q96CJ1 260 aaPredicted RBP9.81□□□□□ -0.84
HTT-209ENST00000512068 ZNF594Q96JF6 807 aaPredicted RBP9.81□□□□□ -0.84
HTT-209ENST00000512068 C22orf23Q9BZE7 217 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 GREM2Q9H772 168 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 COL24A1Q17RW2 1714 aa9.81□□□□□ -0.84
HTT-209ENST00000512068 SPEF2Q9C093 1822 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 TNS1Q9HBL0 1735 aaKnown RBP9.8□□□□□ -0.84
HTT-209ENST00000512068 HRO43593 1189 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 MCCP23508 829 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 SSTR3P32745 418 aaPredicted RBP9.8□□□□□ -0.84
HTT-209ENST00000512068 ST5P78524 1137 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 BECN1Q14457 450 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 CCDC158Q5M9N0 1113 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 SYNE4Q8N205 404 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 PI4K2BQ8TCG2 481 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 EVI5LQ96CN4 794 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 IPO9Q96P70 1041 aaKnown RBP9.8□□□□□ -0.84
HTT-209ENST00000512068 FAM117AQ9C073 453 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 DIAPH3Q9NSV4 1193 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 LRRC4BQ9NT99 713 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 SEPT9Q9UHD8 586 aaPredicted RBP9.8□□□□□ -0.84
HTT-209ENST00000512068 ZNF609O15014 1411 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 MROH5Q6ZUA9 1318 aa9.8□□□□□ -0.84
HTT-209ENST00000512068 MAP4K4O95819 1239 aaPredicted RBP9.79□□□□□ -0.84
HTT-209ENST00000512068 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 LRRFIP1Q32MZ4 808 aaKnown RBP9.79□□□□□ -0.84
HTT-209ENST00000512068 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 LRRC24Q50LG9 513 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 TTC39AQ5SRH9 613 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 KIAA1211Q6ZU35 1233 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 ATG9AQ7Z3C6 839 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 ANKRD18AQ8IVF6 992 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 CNBD1Q8NA66 436 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 FSD1Q9BTV5 496 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
HTT-209ENST00000512068 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
HTT-209ENST00000512068 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
HTT-209ENST00000512068 A0A1B0GUL7 405 aa9.78□□□□□ -0.84
HTT-209ENST00000512068 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
HTT-209ENST00000512068 IL27Q8NEV9 243 aa9.78□□□□□ -0.84
HTT-209ENST00000512068 DNAJC2Q99543 621 aaKnown RBP9.78□□□□□ -0.84
HTT-209ENST00000512068 PUS3Q9BZE2 481 aaKnown RBP9.78□□□□□ -0.84
HTT-209ENST00000512068 BOLA2Q9H3K6 86 aa9.78□□□□□ -0.84
HTT-209ENST00000512068 POTEMA6NI47 508 aa9.77□□□□□ -0.85
HTT-209ENST00000512068 IFIT1P09914 478 aaKnown RBP9.77□□□□□ -0.85
HTT-209ENST00000512068 SLC5A1P13866 664 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms