RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SALL4Q9UJQ4 1053 aa6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 MTMR7Q9Y216 660 aa6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 SART1O43290 800 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 COBLO75128 1261 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 PDGFAP04085 211 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 CDC25BP30305 580 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 CD97P48960 835 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 ANKRD34AQ69YU3 496 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 KIAA1211Q6ZU35 1233 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 TXNDC2Q86VQ3 553 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 FAM46AQ96IP4 442 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 MYRFLQ96LU7 910 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 RNF208Q9H0X6 261 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 SH2B1Q9NRF2 756 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 KCNK4Q9NYG8 393 aa6.41□□□□□ -1.38
TOPBP1-208ENST00000511439 PDE2AO00408 941 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 TM4SF5O14894 197 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 GRIK1P39086 918 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 USP5P45974 858 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 EHHADHQ08426 723 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 KCNA1Q09470 495 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 INTS5Q6P9B9 1019 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 AEBP1Q8IUX7 1158 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 ARMC10Q8N2F6 343 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 DZANK1Q9NVP4 752 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 CNTN3Q9P232 1028 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 HIF3AQ9Y2N7 669 aa6.4□□□□□ -1.38
TOPBP1-208ENST00000511439 ABCC10Q5T3U5 1492 aa6.4□□□□□ -1.39
TOPBP1-208ENST00000511439 SSTR4P31391 388 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 EIF1AXP47813 144 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 NFIAQ12857 509 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 CLEC10AQ8IUN9 316 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 C1orf127Q8N9H9 656 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 TMEM102Q8N9M5 508 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 FOXD4L4Q8WXT5 416 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 KLHDC7BQ96G42 594 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 DBNDD2Q9BQY9 259 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 GNEQ9Y223 722 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 AQRO60306 1485 aaKnown RBP eCLIP6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 CFTRP13569 1480 aa6.39□□□□□ -1.39
TOPBP1-208ENST00000511439 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 FAM13AO94988 1023 aa6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 EDN3P14138 238 aa6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 RNF43Q68DV7 783 aa6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 FDX2Q6P4F2 183 aa6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 GTF3C2Q8WUA4 911 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 GGNBP2Q9H3C7 697 aa6.38□□□□□ -1.39
TOPBP1-208ENST00000511439 TOP2BQ02880 1626 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 KIAA1324LA8MWY0 1029 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 NFKBIEO00221 500 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 ADAM11O75078 769 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 MPSTP25325 297 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 C19orf57Q0VDD7 668 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 AAMPQ13685 434 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 FAM20CQ8IXL6 584 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 CCER1Q8TC90 406 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 SNX29Q8TEQ0 813 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 UBASH3BQ8TF42 649 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 SLC7A3Q8WY07 619 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 BSNDQ8WZ55 320 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 FAM83CQ9BQN1 747 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 C7orf69Q9H7B7 122 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 SOX13Q9UN79 622 aa6.37□□□□□ -1.39
TOPBP1-208ENST00000511439 DIP2BQ9P265 1576 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 MEGF11A6BM72 1044 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 DDX3YO15523 660 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 PHACTR2O75167 634 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 NPR3P17342 541 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 SERPINB4P48594 390 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 SF3B2Q13435 895 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 MCTP1Q6DN14 999 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 ZDHHC13Q8IUH4 622 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 TRIM42Q8IWZ5 723 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 GIMAP7Q8NHV1 300 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 CHRDQ9H2X0 955 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
TOPBP1-208ENST00000511439 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 GAS2O43903 313 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 TGFB1P01137 390 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 BMP3P12645 472 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 NLRP12P59046 1061 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 IKBKEQ14164 716 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 NXPE3Q969Y0 559 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 OSMRQ99650 979 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 KCNF1Q9H3M0 494 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 SOX17Q9H6I2 414 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 EGFL7Q9UHF1 273 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 POLIQ9UNA4 740 aa6.35□□□□□ -1.39
TOPBP1-208ENST00000511439 SNAPC4Q5SXM2 1469 aa6.34□□□□□ -1.39
TOPBP1-208ENST00000511439 HMX2A2RU54 273 aa6.34□□□□□ -1.39
TOPBP1-208ENST00000511439 TNFRSF21O75509 655 aa6.34□□□□□ -1.39
TOPBP1-208ENST00000511439 CYP4F12Q9HCS2 524 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms