RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 RPGRQ92834 1020 aaKnown RBP16.66■□□□□ 0.26
NME1-209ENST00000511355 COL4A1P02462 1669 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
NME1-209ENST00000511355 SYCE3A1L190 88 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 H0YIN7 160 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
NME1-209ENST00000511355 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 MPHOSPH8Q99549 860 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
NME1-209ENST00000511355 KIF3CO14782 793 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 STX6O43752 255 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
NME1-209ENST00000511355 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
NME1-209ENST00000511355 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
NME1-209ENST00000511355 CNNM1Q9NRU3 951 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 SMC3Q9UQE7 1217 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 RIPOR2Q9Y4F9 1068 aa16.64■□□□□ 0.25
NME1-209ENST00000511355 HSPA6P17066 643 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 PDCP20941 246 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 GRAPQ13588 217 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 TSGA10IPQ3SY00 556 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 GRAPLQ8TC17 118 aaPredicted RBP16.63■□□□□ 0.25
NME1-209ENST00000511355 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
NME1-209ENST00000511355 GPR108Q9NPR9 543 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 CYP46A1Q9Y6A2 500 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 MROH5Q6ZUA9 1318 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 A0A1B0GUL6 1792 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 AK2P54819 239 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 TFCP2Q12800 502 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 TTLL6Q8N841 843 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
NME1-209ENST00000511355 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
NME1-209ENST00000511355 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
NME1-209ENST00000511355 ZNF609O15014 1411 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 TAF1P21675 1872 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 TOMM70O94826 608 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 F13A1P00488 732 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 SRGNP10124 158 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 RPS8P62241 208 aaKnown RBP16.62■□□□□ 0.25
NME1-209ENST00000511355 CELF1Q92879 486 aaKnown RBP16.62■□□□□ 0.25
NME1-209ENST00000511355 CRAMP1Q96RY5 1269 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
NME1-209ENST00000511355 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
NME1-209ENST00000511355 TPM3P06753 285 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 NPR1P16066 1061 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 METTL24Q5JXM2 366 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 UBE2Q2Q8WVN8 375 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 PDRG1Q9NUG6 133 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 ZC3H4Q9UPT8 1303 aaKnown RBP16.61■□□□□ 0.25
NME1-209ENST00000511355 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 UTRNP46939 3433 aa16.61■□□□□ 0.25
NME1-209ENST00000511355 SYT1P21579 422 aa16.6■□□□□ 0.25
NME1-209ENST00000511355 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
NME1-209ENST00000511355 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
NME1-209ENST00000511355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.6■□□□□ 0.25
NME1-209ENST00000511355 LRRC37AA6NMS7 1700 aa16.6■□□□□ 0.25
NME1-209ENST00000511355 PDE8BO95263 885 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
NME1-209ENST00000511355 TMC4Q7Z404 712 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
NME1-209ENST00000511355 AACSQ86V21 672 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 EAF2Q96CJ1 260 aaPredicted RBP16.59■□□□□ 0.25
NME1-209ENST00000511355 MASTLQ96GX5 879 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 IL25Q9H293 177 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 ARAP2Q8WZ64 1704 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 ELP1O95163 1332 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 KRT32Q14532 448 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
NME1-209ENST00000511355 NSFL1CQ9UNZ2 370 aaKnown RBP16.59■□□□□ 0.25
NME1-209ENST00000511355 BBOX1O75936 387 aa16.58■□□□□ 0.24
NME1-209ENST00000511355 LMNB1P20700 586 aa16.58■□□□□ 0.24
NME1-209ENST00000511355 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
NME1-209ENST00000511355 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
NME1-209ENST00000511355 CHRNDQ07001 517 aa16.58■□□□□ 0.24
NME1-209ENST00000511355 STYK1Q6J9G0 422 aa16.58■□□□□ 0.24
NME1-209ENST00000511355 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
NME1-209ENST00000511355 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
NME1-209ENST00000511355 HSP90AA2PQ14568 343 aaPredicted RBP16.57■□□□□ 0.24
NME1-209ENST00000511355 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
NME1-209ENST00000511355 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
NME1-209ENST00000511355 MINPP1Q9UNW1 487 aa16.57■□□□□ 0.24
NME1-209ENST00000511355 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
NME1-209ENST00000511355 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
NME1-209ENST00000511355 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
NME1-209ENST00000511355 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
NME1-209ENST00000511355 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms