RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 K7ELQ4 463 aaPredicted RBP11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 KLF4O43474 513 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 TRPA1O75762 1119 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 TFE3P19532 575 aaPredicted RBP11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 ETFBP38117 255 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 TRIM42Q8IWZ5 723 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 ABHD17AQ96GS6 310 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 LRRC3Q9BY71 257 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 UBP1Q9NZI7 540 aa11.85□□□□□ -0.51
SPOCK1-207ENST00000509978 PPM1GO15355 546 aaPredicted RBP11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 FAM160A1Q05DH4 1040 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 APOBRQ0VD83 1088 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 PKDCCQ504Y2 493 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 ANKS3Q6ZW76 656 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 NKD1Q969G9 470 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 NSUN5Q96P11 429 aaKnown RBP11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 HHIPQ96QV1 700 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 PHF24Q9UPV7 400 aa11.84□□□□□ -0.51
SPOCK1-207ENST00000509978 METTL12A8MUP2 240 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 CD33P20138 364 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 FAAP100Q0VG06 881 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 RAB33AQ14088 237 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 LRP10Q7Z4F1 713 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 CCDC155Q8N6L0 562 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 ATP13A2Q9NQ11 1180 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 TMEM39AQ9NV64 488 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
SPOCK1-207ENST00000509978 ZNF662Q6ZS27 426 aa11.82□□□□□ -0.52
SPOCK1-207ENST00000509978 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
SPOCK1-207ENST00000509978 SAMM50Q9Y512 469 aa11.82□□□□□ -0.52
SPOCK1-207ENST00000509978 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 CRKP46108 304 aa11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 ZNF837Q96EG3 531 aaPredicted RBP11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 RASSF4Q9H2L5 321 aa11.81□□□□□ -0.52
SPOCK1-207ENST00000509978 PAGE1O75459 146 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 FGFR3P22607 806 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 RAB44Q7Z6P3 723 aaPredicted RBP11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 ASAP3Q8TDY4 903 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 GATAD2BQ8WXI9 593 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 CLEC4MQ9H2X3 399 aaPredicted RBP11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 CYP8B1Q9UNU6 501 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 MRVI1Q9Y6F6 885 aa11.8□□□□□ -0.52
SPOCK1-207ENST00000509978 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
SPOCK1-207ENST00000509978 HSD3B2P26439 372 aa11.79□□□□□ -0.52
SPOCK1-207ENST00000509978 SHDQ96IW2 340 aa11.79□□□□□ -0.52
SPOCK1-207ENST00000509978 POP1Q99575 1024 aaKnown RBP11.79□□□□□ -0.52
SPOCK1-207ENST00000509978 TRIM55Q9BYV6 548 aa11.79□□□□□ -0.52
SPOCK1-207ENST00000509978 RBSNQ9H1K0 784 aa11.79□□□□□ -0.52
SPOCK1-207ENST00000509978 FAM221AA4D161 298 aa11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 J3QW42 95 aa11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 BMP6P22004 513 aa11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 TNNI3KQ59H18 835 aa11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 SCARA3Q6AZY7 606 aa11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 MUC3BQ9H195 1237 aa11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 GPN3Q9UHW5 284 aaPredicted RBP11.78□□□□□ -0.52
SPOCK1-207ENST00000509978 SOBPA7XYQ1 873 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 U2SURPO15042 1029 aaKnown RBP11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 SMNDC1O75940 238 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 B3GALT4O96024 378 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 F13A1P00488 732 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 GHRHP01286 108 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 NME2P22392 152 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 ITGA6P23229 1130 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 ATP11AP98196 1134 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 MPP2Q14168 576 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 GTPBP3Q969Y2 492 aaKnown RBP11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 MIR1-1HGQ9H1L0 117 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 AAASQ9NRG9 546 aa11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 DNAJB12Q9NXW2 375 aaKnown RBP11.77□□□□□ -0.53
SPOCK1-207ENST00000509978 SIN3BO75182 1162 aa11.76□□□□□ -0.53
SPOCK1-207ENST00000509978 SEZ6Q53EL9 994 aa11.76□□□□□ -0.53
SPOCK1-207ENST00000509978 REXO1Q8N1G1 1221 aaKnown RBP11.76□□□□□ -0.53
SPOCK1-207ENST00000509978 LMNB1P20700 586 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 GIPRP48546 466 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 LRRC14Q15048 493 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 TCEAL1Q15170 157 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 DIEXFQ68CQ4 756 aaKnown RBP11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 OR6P1Q8NGX9 317 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 AVENQ9NQS1 362 aaPredicted RBP11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 R3HCC1Q9Y3T6 440 aaKnown RBP11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 MRPL42Q9Y6G3 142 aaKnown RBP11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
SPOCK1-207ENST00000509978 ENPP3O14638 875 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 CILPO75339 1184 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 CLSTN1O94985 981 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 ZNF165P49910 485 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 CTBSQ01459 385 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 MLLT1Q03111 559 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms