RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	HCLS1	P14317	486 aa	Predicted RBP	12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	PRKG1	Q13976	671 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	NBPF9	Q3BBW0	867 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	PARP10	Q53GL7	1025 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	TMC4	Q7Z404	712 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	AGBL3	Q8NEM8	1001 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	SH3TC2	Q8TF17	1288 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	GML	Q99445	158 aa		12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	UTP14A	Q9BVJ6	771 aa	Known RBP	12.85	□□□□□ -0.35
PTPN20-223	ENST00000509900	NF2	P35240	595 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	GPSM2	P81274	684 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	ARMC9	Q7Z3E5	817 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	PLPP6	Q8IY26	295 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	NECTIN2	Q92692	538 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	MTMR10	Q9NXD2	777 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	FZD1	Q9UP38	647 aa		12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	RRP7A	Q9Y3A4	280 aa	Known RBP	12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	COL3A1	P02461	1466 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN20-223	ENST00000509900	USP17L8	P0C7I0	530 aa		12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	FOXK1	P85037	733 aa		12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	WNK4	Q96J92	1243 aa		12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	PHACTR3	Q96KR7	559 aa		12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	HTATIP2	Q9BUP3	242 aa		12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	ANGEL1	Q9UNK9	670 aa	Known RBP	12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	NR2E3	Q9Y5X4	410 aa		12.83	□□□□□ -0.36
PTPN20-223	ENST00000509900	OTOF	Q9HC10	1997 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	ZBTB48	P10074	688 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	MYL6B	P14649	208 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	POTEE	Q6S8J3	1075 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	CLMN	Q96JQ2	1002 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	EYA3	Q99504	573 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	PTPN18	Q99952	460 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	GPHN	Q9NQX3	736 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	STAP2	Q9UGK3	403 aa		12.82	□□□□□ -0.36
PTPN20-223	ENST00000509900	EYS	Q5T1H1	3165 aa		12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	COL9A1	P20849	921 aa		12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	MTFR1	Q15390	333 aa		12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	MCM10	Q7L590	875 aa		12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	TBC1D16	Q8TBP0	767 aa		12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	CELF1	Q92879	486 aa	Known RBP	12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	SLC10A4	Q96EP9	437 aa		12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN20-223	ENST00000509900	GJA5	P36382	358 aa		12.8	□□□□□ -0.36
PTPN20-223	ENST00000509900	DSG2	Q14126	1118 aa		12.8	□□□□□ -0.36
PTPN20-223	ENST00000509900	PTCD2	Q8WV60	388 aa	Known RBP	12.8	□□□□□ -0.36
PTPN20-223	ENST00000509900	ECM29	Q5VYK3	1845 aa		12.8	□□□□□ -0.36
PTPN20-223	ENST00000509900	PRUNE2	Q8WUY3	3088 aa		12.8	□□□□□ -0.36
PTPN20-223	ENST00000509900	SSC5D	A1L4H1	1573 aa		12.79	□□□□□ -0.36
PTPN20-223	ENST00000509900	WNT10B	O00744	389 aa		12.79	□□□□□ -0.36
PTPN20-223	ENST00000509900	OTUD7B	Q6GQQ9	843 aa		12.79	□□□□□ -0.36
PTPN20-223	ENST00000509900	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.79	□□□□□ -0.36
PTPN20-223	ENST00000509900	MIS18A	Q9NYP9	233 aa		12.79	□□□□□ -0.36
PTPN20-223	ENST00000509900	RAPGEFL1	Q9UHV5	662 aa		12.79	□□□□□ -0.36
PTPN20-223	ENST00000509900	DLG5	Q8TDM6	1919 aa		12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	TESPA1	A2RU30	521 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	U2SURP	O15042	1029 aa	Known RBP	12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	DCTN1	Q14203	1278 aa		12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	ARHGEF6	Q15052	776 aa		12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	MAP3K11	Q16584	847 aa		12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN20-223	ENST00000509900	GJA8	P48165	433 aa		12.77	□□□□□ -0.37
PTPN20-223	ENST00000509900	NLRP10	Q86W26	655 aa		12.77	□□□□□ -0.37
PTPN20-223	ENST00000509900	ARHGAP39	Q9C0H5	1083 aa		12.77	□□□□□ -0.37
PTPN20-223	ENST00000509900	SASH1	O94885	1247 aa		12.76	□□□□□ -0.37
PTPN20-223	ENST00000509900	LRP10	Q7Z4F1	713 aa		12.76	□□□□□ -0.37
PTPN20-223	ENST00000509900	NKX2-3	Q8TAU0	364 aa		12.76	□□□□□ -0.37
PTPN20-223	ENST00000509900	GDF15	Q99988	308 aa		12.76	□□□□□ -0.37
PTPN20-223	ENST00000509900	KNSTRN	Q9Y448	316 aa		12.76	□□□□□ -0.37
PTPN20-223	ENST00000509900	SH3TC1	Q8TE82	1336 aa		12.76	□□□□□ -0.37
PTPN20-223	ENST00000509900	USP17L3	A6NCW0	530 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	USP17L4	A6NCW7	530 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	ARHGAP33	O14559	1287 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	EVI5	O60447	810 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	UFL1	O94874	794 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	PRKAR2B	P31323	418 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	BMP8B	P34820	402 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	MUC3A	Q02505	3323 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	TAF7	Q15545	349 aa	Predicted RBP	12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	USP17L1	Q7RTZ2	530 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	THUMPD2	Q9BTF0	503 aa	Known RBP	12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	PODXL2	Q9NZ53	605 aa		12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	TRMT112	Q9UI30	125 aa	Known RBP	12.75	□□□□□ -0.37
PTPN20-223	ENST00000509900	COL1A1	P02452	1464 aa	Predicted RBP	12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	RPTOR	Q8N122	1335 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	FARP2	O94887	1054 aa	Predicted RBP	12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	GJB1	P08034	283 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	PLA2G5	P39877	138 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	BCAM	P50895	628 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	LRIT3	Q3SXY7	679 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	RTF1	Q92541	710 aa	Known RBP	12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	ZNF428	Q96B54	188 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	MXD3	Q9BW11	206 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	RSPH6A	Q9H0K4	717 aa		12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	RYDEN	Q9NUL5	291 aa	Known RBP	12.74	□□□□□ -0.37
PTPN20-223	ENST00000509900	TBC1D12	O60347	775 aa		12.73	□□□□□ -0.37
PTPN20-223	ENST00000509900	SF3B3	Q15393	1217 aa	Known RBP	12.73	□□□□□ -0.37
PTPN20-223	ENST00000509900	TAF1C	Q15572	869 aa	Predicted RBP	12.73	□□□□□ -0.37
PTPN20-223	ENST00000509900	MGAM	O43451	1857 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms