RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 TCF12Q99081 682 aa7.6□□□□□ -1.19
NFKB1-208ENST00000509165 H3BRJ5 948 aa7.59□□□□□ -1.19
NFKB1-208ENST00000509165 TREHO43280 583 aa7.59□□□□□ -1.19
NFKB1-208ENST00000509165 NRG1Q02297 640 aaPredicted RBP7.59□□□□□ -1.19
NFKB1-208ENST00000509165 VN1R5Q7Z5H4 357 aa7.59□□□□□ -1.19
NFKB1-208ENST00000509165 CCNJLQ8IV13 435 aa7.59□□□□□ -1.19
NFKB1-208ENST00000509165 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
NFKB1-208ENST00000509165 METTL12A8MUP2 240 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 FSCN2O14926 492 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 CDC25BP30305 580 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 LCE1DQ5T752 114 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 AEBP1Q8IUX7 1158 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 BSNDQ8WZ55 320 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 WNT8BQ93098 351 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 CCDC74AQ96AQ1 378 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 ASB16Q96NS5 453 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 KCNK4Q9NYG8 393 aa7.58□□□□□ -1.2
NFKB1-208ENST00000509165 GRIA4P48058 902 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 HGSNATQ68CP4 663 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 TMEM130Q8N3G9 435 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 KLHDC7BQ96G42 594 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
NFKB1-208ENST00000509165 CARD10Q9BWT7 1032 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 USP21Q9UK80 565 aa7.57□□□□□ -1.2
NFKB1-208ENST00000509165 DYRK3O43781 588 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 NOS3P29474 1203 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 CD68P34810 354 aaPredicted RBP7.56□□□□□ -1.2
NFKB1-208ENST00000509165 PIP4K2BP78356 416 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 KLHL23Q8NBE8 558 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
NFKB1-208ENST00000509165 LIN7BQ9HAP6 207 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 SEC31BQ9NQW1 1179 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
NFKB1-208ENST00000509165 NACADO15069 1562 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
NFKB1-208ENST00000509165 SOX1O00570 391 aaPredicted RBP7.55□□□□□ -1.2
NFKB1-208ENST00000509165 ADAM11O75078 769 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 WISP1O95388 367 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 CABP4P57796 275 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 PLCB3Q01970 1234 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 FMR1Q06787 632 aaKnown RBP eCLIP7.55□□□□□ -1.2
NFKB1-208ENST00000509165 ENOX2Q16206 610 aaKnown RBP7.55□□□□□ -1.2
NFKB1-208ENST00000509165 SPRED3Q2MJR0 410 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 FAM117BQ6P1L5 589 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 SND1Q7KZF4 910 aaKnown RBP eCLIP7.55□□□□□ -1.2
NFKB1-208ENST00000509165 ASAP3Q8TDY4 903 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 DCAF11Q8TEB1 546 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
NFKB1-208ENST00000509165 OSGEPQ9NPF4 335 aa7.55□□□□□ -1.2
NFKB1-208ENST00000509165 A0A096LPE4 126 aa7.54□□□□□ -1.2
NFKB1-208ENST00000509165 A0A1W2PPZ6 126 aa7.54□□□□□ -1.2
NFKB1-208ENST00000509165 DDX3YO15523 660 aaKnown RBP7.54□□□□□ -1.2
NFKB1-208ENST00000509165 COBLO75128 1261 aa7.54□□□□□ -1.2
NFKB1-208ENST00000509165 PRSS36Q5K4E3 855 aa7.54□□□□□ -1.2
NFKB1-208ENST00000509165 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
NFKB1-208ENST00000509165 Q6ZS46 218 aa7.54□□□□□ -1.2
NFKB1-208ENST00000509165 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.54□□□□□ -1.2
NFKB1-208ENST00000509165 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
NFKB1-208ENST00000509165 GLIS3Q8NEA6 775 aa7.54□□□□□ -1.2
NFKB1-208ENST00000509165 EPS8L3Q8TE67 593 aaKnown RBP7.54□□□□□ -1.2
NFKB1-208ENST00000509165 PNMA6FA0A0J9YX94 578 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 FAM177BA6PVY3 158 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 ALX3O95076 343 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
NFKB1-208ENST00000509165 ITPKAP23677 461 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
NFKB1-208ENST00000509165 IKBKEQ14164 716 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 MEGF10Q96KG7 1140 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 ABCB6Q9NP58 842 aa7.53□□□□□ -1.2
NFKB1-208ENST00000509165 GRM2Q14416 872 aa7.52□□□□□ -1.21
NFKB1-208ENST00000509165 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
NFKB1-208ENST00000509165 KIAA1211Q6ZU35 1233 aa7.52□□□□□ -1.21
NFKB1-208ENST00000509165 SLC7A3Q8WY07 619 aa7.52□□□□□ -1.21
NFKB1-208ENST00000509165 EHD4Q9H223 541 aa7.52□□□□□ -1.21
NFKB1-208ENST00000509165 SOX17Q9H6I2 414 aaPredicted RBP7.52□□□□□ -1.21
NFKB1-208ENST00000509165 AKTIPQ9H8T0 292 aa7.52□□□□□ -1.21
NFKB1-208ENST00000509165 C19orf57Q0VDD7 668 aa7.51□□□□□ -1.21
NFKB1-208ENST00000509165 ZNF423Q2M1K9 1284 aa7.51□□□□□ -1.21
NFKB1-208ENST00000509165 DZIP1LQ8IYY4 767 aaKnown RBP7.51□□□□□ -1.21
NFKB1-208ENST00000509165 AGGF1Q8N302 714 aaeCLIP7.51□□□□□ -1.21
NFKB1-208ENST00000509165 UBASH3BQ8TF42 649 aa7.51□□□□□ -1.21
NFKB1-208ENST00000509165 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
NFKB1-208ENST00000509165 NRSN2Q9GZP1 204 aa7.51□□□□□ -1.21
NFKB1-208ENST00000509165 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
NFKB1-208ENST00000509165 ZNF576Q9H609 170 aa7.51□□□□□ -1.21
NFKB1-208ENST00000509165 HYAL3O43820 417 aaPredicted RBP7.5□□□□□ -1.21
NFKB1-208ENST00000509165 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
NFKB1-208ENST00000509165 PCDH1Q08174 1060 aa7.5□□□□□ -1.21
NFKB1-208ENST00000509165 LRP8Q14114 963 aa7.5□□□□□ -1.21
NFKB1-208ENST00000509165 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
NFKB1-208ENST00000509165 GADD45BO75293 160 aaPredicted RBP7.49□□□□□ -1.21
NFKB1-208ENST00000509165 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
NFKB1-208ENST00000509165 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
NFKB1-208ENST00000509165 ACAD11Q709F0 780 aa7.49□□□□□ -1.21
NFKB1-208ENST00000509165 WWC3Q9ULE0 1092 aa7.49□□□□□ -1.21
NFKB1-208ENST00000509165 MAPK8P45983 427 aa7.48□□□□□ -1.21
NFKB1-208ENST00000509165 ARL4DP49703 201 aa7.48□□□□□ -1.21
NFKB1-208ENST00000509165 NLRP12P59046 1061 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms