RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 AMIGO3Q86WK7 504 aa9.98□□□□□ -0.81
CCSER1-208ENST00000509109 KDF1Q8NAX2 398 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-208ENST00000509109 CEP350Q5VT06 3117 aa9.98□□□□□ -0.81
CCSER1-208ENST00000509109 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-208ENST00000509109 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
CCSER1-208ENST00000509109 UBR2Q8IWV8 1755 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 WIPF1O43516 503 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
CCSER1-208ENST00000509109 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 MMP10P09238 476 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 YBX3P16989 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCSER1-208ENST00000509109 NFATC2IPQ8NCF5 419 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 GDPD2Q9HCC8 539 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
CCSER1-208ENST00000509109 RPS6KA4O75676 772 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 HMOX1P09601 288 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 ABL2P42684 1182 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 PTGIRP43119 386 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 IRF5Q13568 498 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 CFAP53Q96M91 514 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 PCDHB11Q9Y5F2 797 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
CCSER1-208ENST00000509109 CRKLP46109 303 aaKnown RBP9.95□□□□□ -0.82
CCSER1-208ENST00000509109 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
CCSER1-208ENST00000509109 PTSQ03393 145 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 CCDC87Q9NVE4 849 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 PXDNLA1KZ92 1463 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 KIAA1551Q9HCM1 1747 aa9.95□□□□□ -0.82
CCSER1-208ENST00000509109 BRCA1P38398 1863 aaKnown RBP9.94□□□□□ -0.82
CCSER1-208ENST00000509109 SIPA1L3O60292 1781 aaPredicted RBP9.94□□□□□ -0.82
CCSER1-208ENST00000509109 N4BP2Q86UW6 1770 aaPredicted RBP9.94□□□□□ -0.82
CCSER1-208ENST00000509109 KCPQ6ZWJ8 1503 aa9.94□□□□□ -0.82
CCSER1-208ENST00000509109 USP42Q9H9J4 1324 aaKnown RBP9.94□□□□□ -0.82
CCSER1-208ENST00000509109 U2SURPO15042 1029 aaKnown RBP9.94□□□□□ -0.82
CCSER1-208ENST00000509109 SCTRP47872 440 aa9.94□□□□□ -0.82
CCSER1-208ENST00000509109 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
CCSER1-208ENST00000509109 PARP3Q9Y6F1 533 aa9.94□□□□□ -0.82
CCSER1-208ENST00000509109 ATP10DQ9P241 1426 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
CCSER1-208ENST00000509109 GYS1P13807 737 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 TGFB2P61812 414 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 MCM6Q14566 821 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
CCSER1-208ENST00000509109 CC2D2BQ6DHV5 1058 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 TTC5Q8N0Z6 440 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 RNF217Q8TC41 542 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 CEP126Q9P2H0 1117 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 ARFGEF1Q9Y6D6 1849 aa9.93□□□□□ -0.82
CCSER1-208ENST00000509109 ADCY9O60503 1353 aa9.92□□□□□ -0.82
CCSER1-208ENST00000509109 C1QTNF8P60827 252 aa9.92□□□□□ -0.82
CCSER1-208ENST00000509109 ERVK-9P63128 1117 aa9.92□□□□□ -0.82
CCSER1-208ENST00000509109 TEFQ10587 303 aa9.92□□□□□ -0.82
CCSER1-208ENST00000509109 MTHFSDQ2M296 383 aaKnown RBP9.92□□□□□ -0.82
CCSER1-208ENST00000509109 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
CCSER1-208ENST00000509109 NUDCQ9Y266 331 aa9.92□□□□□ -0.82
CCSER1-208ENST00000509109 COL15A1P39059 1388 aa9.91□□□□□ -0.82
CCSER1-208ENST00000509109 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
CCSER1-208ENST00000509109 GNAT3A8MTJ3 354 aa9.91□□□□□ -0.82
CCSER1-208ENST00000509109 MEN1O00255 615 aa9.91□□□□□ -0.82
CCSER1-208ENST00000509109 INSM1Q01101 510 aaPredicted RBP9.91□□□□□ -0.82
CCSER1-208ENST00000509109 CNGB1Q14028 1251 aaPredicted RBP9.91□□□□□ -0.82
CCSER1-208ENST00000509109 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
CCSER1-208ENST00000509109 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
CCSER1-208ENST00000509109 STARD3NLO95772 234 aa9.9□□□□□ -0.82
CCSER1-208ENST00000509109 DNAJC10Q8IXB1 793 aa9.9□□□□□ -0.82
CCSER1-208ENST00000509109 CCDC155Q8N6L0 562 aa9.9□□□□□ -0.82
CCSER1-208ENST00000509109 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
CCSER1-208ENST00000509109 DLEC1Q9Y238 1755 aa9.89□□□□□ -0.83
CCSER1-208ENST00000509109 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
CCSER1-208ENST00000509109 CYP19A1P11511 503 aaPredicted RBP9.89□□□□□ -0.83
CCSER1-208ENST00000509109 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
CCSER1-208ENST00000509109 INTS5Q6P9B9 1019 aaKnown RBP9.89□□□□□ -0.83
CCSER1-208ENST00000509109 PRICKLE2Q7Z3G6 844 aa9.89□□□□□ -0.83
CCSER1-208ENST00000509109 NPM2Q86SE8 214 aaKnown RBP9.89□□□□□ -0.83
CCSER1-208ENST00000509109 TEX13AQ9BXU3 409 aaPredicted RBP9.89□□□□□ -0.83
CCSER1-208ENST00000509109 WWC3Q9ULE0 1092 aa9.89□□□□□ -0.83
CCSER1-208ENST00000509109 BCS1LQ9Y276 419 aa9.89□□□□□ -0.83
CCSER1-208ENST00000509109 AFDNP55196 1824 aaKnown RBP9.89□□□□□ -0.83
CCSER1-208ENST00000509109 NRXN2Q9P2S2 1712 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 A0A087WZG4 1122 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 A0A1W2PRU2 124 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 NEFMP07197 916 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 TSGA10IPQ3SY00 556 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 OSBPL3Q9H4L5 887 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 SRP68Q9UHB9 627 aaKnown RBP9.88□□□□□ -0.83
CCSER1-208ENST00000509109 NARFQ9UHQ1 456 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 HEG1Q9ULI3 1381 aa9.88□□□□□ -0.83
CCSER1-208ENST00000509109 A0A0G2JLW4 131 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 SLC35F4A4IF30 521 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 U2AF1L5P0DN76 240 aaPredicted RBP9.87□□□□□ -0.83
CCSER1-208ENST00000509109 VSIG8P0DPA2 414 aa9.87□□□□□ -0.83
CCSER1-208ENST00000509109 RHOQP17081 205 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms