RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ODF2LQ9ULJ1 636 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 WDHD1O75717 1129 aaPredicted RBP11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 FNTAP49354 379 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 ADCK5Q3MIX3 580 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 WLSQ5T9L3 541 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 CAPN7Q9Y6W3 813 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 CDHR2Q9BYE9 1310 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 FSBPO95073 299 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 FAM160A1Q05DH4 1040 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 GRIK3Q13003 919 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 ENGASEQ8NFI3 743 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 PHACTR3Q96KR7 559 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 A0A1W2PP64 1363 aa11.5□□□□□ -0.57
PDGFRA-207ENST00000509092 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 SYF2O95926 243 aaKnown RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 GNAI2P04899 355 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 FANCCQ00597 558 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 TUBB2AQ13885 445 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 TMEM139Q8IV31 216 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 CCDC12Q8WUD4 166 aaPredicted RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 SMARCC1Q92922 1105 aaPredicted RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 TUBB2BQ9BVA1 445 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 ZSWIM4Q9H7M6 989 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 CD248Q9HCU0 757 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 TERF2IPQ9NYB0 399 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 ARHGEF28Q8N1W1 1705 aaKnown RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 TTC36A6NLP5 189 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 MPHOSPH10O00566 681 aaKnown RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 VSNL1P62760 191 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 ADCY2Q08462 1091 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 FBXO31Q5XUX0 539 aaPredicted RBP11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 ETAA1Q9NY74 926 aa11.49□□□□□ -0.57
PDGFRA-207ENST00000509092 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 RTN2O75298 545 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 SKIDA1Q1XH10 827 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 TATDN2Q93075 761 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 CDC23Q9UJX2 597 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 CCT4P50991 539 aaKnown RBP11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 DPCR1Q3MIW9 517 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 AP1ARQ63HQ0 302 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 CNTROBQ8N137 903 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 FAM210AQ96ND0 272 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 SPG7Q9UQ90 795 aa11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
PDGFRA-207ENST00000509092 A0A1B0GUA9 196 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 MYO1FO00160 1098 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 IRAK1P51617 712 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 ICA1Q05084 483 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 NCAPHQ15003 741 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 ANKRD1Q15327 319 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 PRPF40BQ6NWY9 871 aaKnown RBP11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 IGSF22Q8N9C0 903 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 ZNF483Q8TF39 744 aaPredicted RBP11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 SH3GL3Q99963 347 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 PPLO60437 1756 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 ITSN1Q15811 1721 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 VSTM4Q8IW00 320 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 PI4K2BQ8TCG2 481 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 KAT14Q9H8E8 782 aa11.47□□□□□ -0.57
PDGFRA-207ENST00000509092 SOS1Q07889 1333 aaPredicted RBP11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 IKBKBO14920 756 aa11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 RAB11FIP3O75154 756 aa11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 MAP4K4O95819 1239 aaPredicted RBP11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 CCNHP51946 323 aaPredicted RBP11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 ATP8B2P98198 1209 aa11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 SPATS2Q86XZ4 545 aaKnown RBP11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 FAM76AQ8TAV0 307 aa11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 ABCC6O95255 1503 aa11.46□□□□□ -0.57
PDGFRA-207ENST00000509092 C3P01024 1663 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 FYB1O15117 783 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 STX10O60499 249 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 KIAA0754O94854 1291 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 WDR93Q6P2C0 686 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 B4GALNT4Q76KP1 1039 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 FSIP1Q8NA03 581 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 ARMC2Q8NEN0 867 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 BCAS4Q8TDM0 211 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 RUFY2Q8WXA3 655 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 BAG1Q99933 345 aaPredicted RBP11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 PIK3C2BO00750 1634 aa11.46□□□□□ -0.58
PDGFRA-207ENST00000509092 SPATA31D1Q6ZQQ2 1576 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 RHOXF2BP0C7M4 288 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 ADD1P35611 737 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 CLNS1AP54105 237 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms