RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MYO1HQ8N1T3 1032 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 MGARPQ8TDB4 240 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 CUEDC1Q9NWM3 386 aaPredicted RBP4.58□□□□□ -1.68
NEDD4-209ENST00000508871 ZNF232Q9UNY5 417 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 LZTS1Q9Y250 596 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 SETD1BQ9UPS6 1966 aaKnown RBP4.58□□□□□ -1.68
NEDD4-209ENST00000508871 NCKAP5LQ9HCH0 1330 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 CAMTA1Q9Y6Y1 1673 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 CPSF1Q10570 1443 aaKnown RBP4.58□□□□□ -1.68
NEDD4-209ENST00000508871 F6X3S4 739 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 SNUPNO95149 360 aaKnown RBP4.58□□□□□ -1.68
NEDD4-209ENST00000508871 POU5F1BQ06416 359 aa4.58□□□□□ -1.68
NEDD4-209ENST00000508871 CTNNBL1Q8WYA6 563 aaPredicted RBP4.58□□□□□ -1.68
NEDD4-209ENST00000508871 CDC27P30260 824 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 GBP2P32456 591 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 CHAF1AQ13111 956 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 QPCTQ16769 361 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 IWS1Q96ST2 819 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 AP1M1Q9BXS5 423 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 TMCO5BA8MYB1 307 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 RECKO95980 971 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 PUM3Q15397 648 aaKnown RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 FAAH2Q6GMR7 532 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 EP400NLQ6ZTU2 488 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 BTN2A2Q8WVV5 523 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 TSR2Q969E8 191 aaKnown RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 PICK1Q9NRD5 415 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 RBM28Q9NW13 759 aaKnown RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 PPP1R9AQ9ULJ8 1098 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 GNEQ9Y223 722 aaKnown RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 KNSTRNQ9Y448 316 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 LMTK3Q96Q04 1460 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 XPOTO43592 962 aaKnown RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 STRN3Q13033 797 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 UBE4AQ14139 1066 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 TGIF2Q9GZN2 237 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 CNNM2Q9H8M5 875 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 KIAA0754O94854 1291 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 ADCY1Q08828 1119 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 PSMD6Q15008 389 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 UBE2Q1Q7Z7E8 422 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 NOL10Q9BSC4 688 aaKnown RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 SSUH2Q9Y2M2 353 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 MST1RQ04912 1400 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 NSD3Q9BZ95 1437 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 TRPM3Q9HCF6 1732 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-209ENST00000508871 FAM177BA6PVY3 158 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 B4DLN1 442 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 XBP1P17861 261 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 RRM1P23921 792 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 SNX16P57768 344 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 MYBPC2Q14324 1141 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 KCTD2Q14681 263 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 SEPT2Q15019 361 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 ALFQ53S48 1182 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 IQSEC1Q6DN90 963 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 PRR7Q8TB68 274 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 PANK3Q9H999 370 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 FBRSQ9HAH7 460 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 LRCH1Q9Y2L9 728 aa4.57□□□□□ -1.68
NEDD4-209ENST00000508871 CDK12Q9NYV4 1490 aaPredicted RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 LMBRD2Q68DH5 695 aaPredicted RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 PPHLN1Q8NEY8 458 aaKnown RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 USP7Q93009 1102 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 SCYL1Q96KG9 808 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 DEPDC7Q96QD5 511 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 FAM217BQ9NTX9 383 aaPredicted RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 SEPT3Q9UH03 358 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 EFR3BQ9Y2G0 817 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 ADD2P35612 726 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 GUCY2FP51841 1108 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 CTDSPL2Q05D32 466 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 DSG2Q14126 1118 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 ACAP2Q15057 778 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 PIF1Q9H611 641 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 MAP2P11137 1827 aaKnown RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 PMS1P54277 932 aaKnown RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 CHADLQ6NUI6 762 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 GEMIN8Q9NWZ8 242 aaKnown RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 AATKQ6ZMQ8 1374 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 C21orf2O43822 256 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 RNASE9P60153 205 aaKnown RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 ZNF394Q53GI3 561 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 SDF4Q9BRK5 362 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 REPIN1Q9BWE0 567 aaKnown RBP4.56□□□□□ -1.68
NEDD4-209ENST00000508871 CCDC39Q9UFE4 941 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 CRYBG1Q9Y4K1 1723 aa4.56□□□□□ -1.68
NEDD4-209ENST00000508871 IRS4O14654 1257 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 BPNT1O95861 308 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SKOR1P84550 965 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TMCO5AQ8N6Q1 288 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 PARD3BQ8TEW8 1205 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SPIRE2Q8WWL2 714 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 RUNDC1Q96C34 613 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 GPATCH3Q96I76 525 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ASB16Q96NS5 453 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ODF2LQ9ULJ1 636 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 RABL2BQ9UNT1 228 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms