RNA–Protein interactions for RNA: ENST00000508699.1

SPATA4-202, Transcript of spermatogenesis associated 4, humanhuman

TSL 3

Gene SPATA4, Length 403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA4-202ENST00000508699 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
SPATA4-202ENST00000508699 RTCBQ9Y3I0 505 aaKnown RBP7.35□□□□□ -1.23
SPATA4-202ENST00000508699 USP17L3A6NCW0 530 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 USP17L4A6NCW7 530 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 ATP5J2-PTCD1G3V325 749 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 BMP2P12643 396 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 PTGIRP43119 386 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 COL23A1Q86Y22 540 aaPredicted RBP7.34□□□□□ -1.23
SPATA4-202ENST00000508699 PURBQ96QR8 312 aaKnown RBP7.34□□□□□ -1.23
SPATA4-202ENST00000508699 ZNF395Q9H8N7 513 aaPredicted RBP7.34□□□□□ -1.23
SPATA4-202ENST00000508699 SENP2Q9HC62 589 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 NOD1Q9Y239 953 aa7.34□□□□□ -1.23
SPATA4-202ENST00000508699 MAFBQ9Y5Q3 323 aaPredicted RBP7.34□□□□□ -1.23
SPATA4-202ENST00000508699 KDM6AO15550 1401 aaPredicted RBP7.34□□□□□ -1.23
SPATA4-202ENST00000508699 ITGB4P16144 1822 aa7.34□□□□□ -1.24
SPATA4-202ENST00000508699 CNTNAP4Q9C0A0 1308 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 C4BP0C0L5 1744 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 YY1P25490 414 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 TEFQ10587 303 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 TRAPPC3LQ5T215 181 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 CYP2U1Q7Z449 544 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 PLEKHM2Q8IWE5 1019 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 LINC00528Q8N1L1 170 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 LINC00116Q8NCU8 138 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 C1orf115Q9H7X2 142 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
SPATA4-202ENST00000508699 GNAT3A8MTJ3 354 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 RNMTO43148 476 aaKnown RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 PTCD1O75127 700 aaKnown RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 U2AF1L5P0DN76 240 aaPredicted RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 RFX1P22670 979 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 PPP2R1AP30153 589 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 RFC4P35249 363 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 U2AF1Q01081 240 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 ITPK1Q13572 414 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 GPR162Q16538 588 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 MSL1Q68DK7 614 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 TTC5Q8N0Z6 440 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 KDF1Q8NAX2 398 aaPredicted RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 ZFP42Q96MM3 310 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 PNNQ9H307 717 aaKnown RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
SPATA4-202ENST00000508699 CD2APQ9Y5K6 639 aa7.32□□□□□ -1.24
SPATA4-202ENST00000508699 COL3A1P02461 1466 aaPredicted RBP7.31□□□□□ -1.24
SPATA4-202ENST00000508699 GRIN3BO60391 1043 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 RPS6KA4O75676 772 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 GNRH1P01148 92 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 MTHFSDQ2M296 383 aaKnown RBP7.31□□□□□ -1.24
SPATA4-202ENST00000508699 NLGN1Q8N2Q7 840 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 CCDC82Q8N4S0 544 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 RTF1Q92541 710 aaKnown RBP7.31□□□□□ -1.24
SPATA4-202ENST00000508699 KIFC2Q96AC6 838 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 ZNF831Q5JPB2 1677 aa7.31□□□□□ -1.24
SPATA4-202ENST00000508699 MRC1P22897 1456 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 TAF1LQ8IZX4 1826 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 A0A1W2PRU2 124 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 MEN1O00255 615 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 SPINT1O43278 529 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 STARD3NLO95772 234 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 PRKAR2BP31323 418 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 GTF2IP78347 998 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 RALBP1Q15311 655 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 NPM2Q86SE8 214 aaKnown RBP7.3□□□□□ -1.24
SPATA4-202ENST00000508699 TRIM50Q86XT4 487 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 INSM2Q96T92 566 aaPredicted RBP7.3□□□□□ -1.24
SPATA4-202ENST00000508699 TEX13AQ9BXU3 409 aaPredicted RBP7.3□□□□□ -1.24
SPATA4-202ENST00000508699 VRTNQ9H8Y1 702 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 PCDHGA11Q9Y5H2 935 aa7.3□□□□□ -1.24
SPATA4-202ENST00000508699 TUBGCP6Q96RT7 1819 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 POTECB2RU33 542 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 MMP10P09238 476 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 CRKLP46109 303 aaKnown RBP7.29□□□□□ -1.24
SPATA4-202ENST00000508699 NLRP3Q96P20 1036 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 LGR6Q9HBX8 967 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 ARHGEF10LQ9HCE6 1279 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 POLMQ9NP87 494 aaPredicted RBP7.29□□□□□ -1.24
SPATA4-202ENST00000508699 RAB6BQ9NRW1 208 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 CCDC87Q9NVE4 849 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 COL24A1Q17RW2 1714 aa7.29□□□□□ -1.24
SPATA4-202ENST00000508699 A0A087WZG4 1122 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 HTATSF1O43719 755 aaKnown RBP7.28□□□□□ -1.24
SPATA4-202ENST00000508699 RASA1P20936 1047 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 FMNL2Q96PY5 1086 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 SLC4A9Q96Q91 983 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 DNAAF2Q9NVR5 837 aaKnown RBP7.28□□□□□ -1.24
SPATA4-202ENST00000508699 PARP3Q9Y6F1 533 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 SCN11AQ9UI33 1791 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 UBR3Q6ZT12 1888 aa7.28□□□□□ -1.24
SPATA4-202ENST00000508699 MAPK8IP3Q9UPT6 1336 aa7.27□□□□□ -1.24
SPATA4-202ENST00000508699 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
SPATA4-202ENST00000508699 BTBD11A6QL63 1104 aa7.27□□□□□ -1.25
SPATA4-202ENST00000508699 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
SPATA4-202ENST00000508699 CTSOP43234 321 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms