RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CCNJLQ8IV13 435 aa10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 AGGF1Q8N302 714 aaeCLIP10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 TCF12Q99081 682 aa10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 SEMA6BQ9H3T3 888 aa10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 KIAA0319Q5VV43 1072 aa10.04□□□□□ -0.8
TOPBP1-206ENST00000508524 DZIP1LQ8IYY4 767 aaKnown RBP10.04□□□□□ -0.8
TOPBP1-206ENST00000508524 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
TOPBP1-206ENST00000508524 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
TOPBP1-206ENST00000508524 NPHS2Q9NP85 383 aa10.04□□□□□ -0.8
TOPBP1-206ENST00000508524 ACAD11Q709F0 780 aa10.03□□□□□ -0.8
TOPBP1-206ENST00000508524 UBASH3BQ8TF42 649 aa10.03□□□□□ -0.8
TOPBP1-206ENST00000508524 SLC7A3Q8WY07 619 aa10.03□□□□□ -0.8
TOPBP1-206ENST00000508524 LIN7BQ9HAP6 207 aa10.03□□□□□ -0.8
TOPBP1-206ENST00000508524 SOX1O00570 391 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 H2AFB1P0C5Y9 115 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 GRIA4P48058 902 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 IKBKEQ14164 716 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 CCDC74AQ96AQ1 378 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 CSRNP1Q96S65 589 aa10.02□□□□□ -0.81
TOPBP1-206ENST00000508524 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
TOPBP1-206ENST00000508524 MAPK1P28482 360 aa10.01□□□□□ -0.81
TOPBP1-206ENST00000508524 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
TOPBP1-206ENST00000508524 DUOXA2Q1HG44 320 aa10.01□□□□□ -0.81
TOPBP1-206ENST00000508524 A0A096LPE4 126 aa10□□□□□ -0.81
TOPBP1-206ENST00000508524 A0A1W2PPZ6 126 aa10□□□□□ -0.81
TOPBP1-206ENST00000508524 NLRP12P59046 1061 aa10□□□□□ -0.81
TOPBP1-206ENST00000508524 DSC3Q14574 896 aa10□□□□□ -0.81
TOPBP1-206ENST00000508524 SPRED3Q2MJR0 410 aa10□□□□□ -0.81
TOPBP1-206ENST00000508524 TREHO43280 583 aa9.99□□□□□ -0.81
TOPBP1-206ENST00000508524 GLB1P16278 677 aa9.99□□□□□ -0.81
TOPBP1-206ENST00000508524 EHD4Q9H223 541 aa9.99□□□□□ -0.81
TOPBP1-206ENST00000508524 SOX17Q9H6I2 414 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-206ENST00000508524 ARL4DP49703 201 aa9.98□□□□□ -0.81
TOPBP1-206ENST00000508524 UBL7Q96S82 380 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-206ENST00000508524 EPS8L3Q8TE67 593 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-206ENST00000508524 CLEC4MQ9H2X3 399 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-206ENST00000508524 ITPKAP23677 461 aa9.96□□□□□ -0.82
TOPBP1-206ENST00000508524 PCDH1Q08174 1060 aa9.96□□□□□ -0.82
TOPBP1-206ENST00000508524 ZNF423Q2M1K9 1284 aa9.96□□□□□ -0.82
TOPBP1-206ENST00000508524 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-206ENST00000508524 ABCB6Q9NP58 842 aa9.96□□□□□ -0.82
TOPBP1-206ENST00000508524 LOC100996750A0A140TA64 210 aa9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 PATL2C9JE40 543 aaKnown RBP9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 PRSS36Q5K4E3 855 aa9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 GLIS3Q8NEA6 775 aa9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 KRTAP4-6Q9BYQ5 205 aa9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 NRSN2Q9GZP1 204 aa9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 ZNF576Q9H609 170 aa9.95□□□□□ -0.82
TOPBP1-206ENST00000508524 GADD45BO75293 160 aaPredicted RBP9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 GRM2Q14416 872 aa9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 ENOX2Q16206 610 aaKnown RBP9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 PI16Q6UXB8 463 aa9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 PRR23CQ6ZRP0 262 aa9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 ASB16Q96NS5 453 aa9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 RUSC1Q9BVN2 902 aa9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 CEP41Q9BYV8 373 aa9.94□□□□□ -0.82
TOPBP1-206ENST00000508524 PNMA6FA0A0J9YX94 578 aa9.93□□□□□ -0.82
TOPBP1-206ENST00000508524 LOC100289279A0A1B0GTE1 492 aa9.93□□□□□ -0.82
TOPBP1-206ENST00000508524 PLCB3Q01970 1234 aa9.93□□□□□ -0.82
TOPBP1-206ENST00000508524 ARMC10Q8N2F6 343 aa9.93□□□□□ -0.82
TOPBP1-206ENST00000508524 FAM46AQ96IP4 442 aaKnown RBP9.93□□□□□ -0.82
TOPBP1-206ENST00000508524 RNF208Q9H0X6 261 aa9.93□□□□□ -0.82
TOPBP1-206ENST00000508524 DLGAP3O95886 979 aa9.92□□□□□ -0.82
TOPBP1-206ENST00000508524 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
TOPBP1-206ENST00000508524 GSTM4Q03013 218 aa9.92□□□□□ -0.82
TOPBP1-206ENST00000508524 PTPN12Q05209 780 aaKnown RBP9.92□□□□□ -0.82
TOPBP1-206ENST00000508524 FMR1Q06787 632 aaKnown RBP eCLIP9.92□□□□□ -0.82
TOPBP1-206ENST00000508524 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
TOPBP1-206ENST00000508524 TMEM238LA0A1B0GVL6 79 aa9.91□□□□□ -0.82
TOPBP1-206ENST00000508524 MEGF11A6BM72 1044 aa9.91□□□□□ -0.82
TOPBP1-206ENST00000508524 B3GALT4O96024 378 aa9.91□□□□□ -0.82
TOPBP1-206ENST00000508524 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
TOPBP1-206ENST00000508524 TMPRSS13Q9BYE2 586 aa9.91□□□□□ -0.82
TOPBP1-206ENST00000508524 TRAK1Q9UPV9 953 aa9.91□□□□□ -0.82
TOPBP1-206ENST00000508524 PREPP48147 710 aa9.9□□□□□ -0.82
TOPBP1-206ENST00000508524 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
TOPBP1-206ENST00000508524 ANKRD34AQ69YU3 496 aa9.9□□□□□ -0.82
TOPBP1-206ENST00000508524 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
TOPBP1-206ENST00000508524 TRIM56Q9BRZ2 755 aaKnown RBP9.89□□□□□ -0.83
TOPBP1-206ENST00000508524 NLRP2Q9NX02 1062 aa9.89□□□□□ -0.83
TOPBP1-206ENST00000508524 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
TOPBP1-206ENST00000508524 UTP4Q969X6 686 aaKnown RBP9.88□□□□□ -0.83
TOPBP1-206ENST00000508524 MYRFLQ96LU7 910 aa9.88□□□□□ -0.83
TOPBP1-206ENST00000508524 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
TOPBP1-206ENST00000508524 DHX15O43143 795 aaKnown RBP9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 CTSBP07858 339 aa9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 MAPK8P45983 427 aa9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 RPS26P11Q5JNZ5 115 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 FDX2Q6P4F2 183 aa9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 SND1Q7KZF4 910 aaKnown RBP eCLIP9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 BCO2Q9BYV7 579 aa9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 SUGCTQ9HAC7 445 aa9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 RAXQ9Y2V3 346 aa9.87□□□□□ -0.83
TOPBP1-206ENST00000508524 TIAF1O95411 115 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms