RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 PDE4CQ08493 712 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 LRP10Q7Z4F1 713 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 SLC51AQ86UW1 340 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 CNBD1Q8NA66 436 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 ZNF592Q92610 1267 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
SH3D19-208ENST00000508492 SETDB2Q96T68 719 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 MAP10Q9P2G4 905 aa10.16□□□□□ -0.78
SH3D19-208ENST00000508492 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 APAF1O14727 1248 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
SH3D19-208ENST00000508492 C1QTNF8P60827 252 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 C9orf131Q5VYM1 1079 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 NPM2Q86SE8 214 aaKnown RBP10.15□□□□□ -0.78
SH3D19-208ENST00000508492 FAM160A2Q8N612 972 aaPredicted RBP10.15□□□□□ -0.78
SH3D19-208ENST00000508492 ZNF622Q969S3 477 aaKnown RBP eCLIP10.15□□□□□ -0.78
SH3D19-208ENST00000508492 ZNF428Q96B54 188 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 NUDT12Q9BQG2 462 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 EVA1BQ9NVM1 165 aa10.15□□□□□ -0.78
SH3D19-208ENST00000508492 NIP7Q9Y221 180 aaKnown RBP eCLIP10.15□□□□□ -0.78
SH3D19-208ENST00000508492 MAP3K15Q6ZN16 1313 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 H0YIN7 160 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 NFKBIEO00221 500 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 ADH1BP00325 375 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 GPTP24298 496 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 RNF181Q9P0P0 153 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 GPSM3Q9Y4H4 160 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 COL4A1P02462 1669 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 SPEF2Q9C093 1822 aa10.14□□□□□ -0.79
SH3D19-208ENST00000508492 CHL1O00533 1208 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 NPHP1O15259 732 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 LMOD3Q0VAK6 560 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 KCNH2Q12809 1159 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 OLFM4Q6UX06 510 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 NBPF5PQ86XG9 351 aaPredicted RBP10.13□□□□□ -0.79
SH3D19-208ENST00000508492 TTLL6Q8N841 843 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 RETREG2Q8NC44 543 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 BRIP1Q9BX63 1249 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 NMRK2Q9NPI5 230 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 PLA2G2EQ9NZK7 142 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
SH3D19-208ENST00000508492 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
SH3D19-208ENST00000508492 C21orf2O43822 256 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 SRGNP10124 158 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 PDE6BP35913 854 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 ST5P78524 1137 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 CLEC4GQ6UXB4 293 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 MTRQ99707 1265 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
SH3D19-208ENST00000508492 MYH3P11055 1940 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 WDR90Q96KV7 1748 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
SH3D19-208ENST00000508492 ERFEQ4G0M1 354 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 SUSD4Q5VX71 490 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
SH3D19-208ENST00000508492 KIF6Q6ZMV9 814 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 UCN2Q96RP3 112 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 CHPF2Q9P2E5 772 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 CACNA1FO60840 1977 aa10.11□□□□□ -0.79
SH3D19-208ENST00000508492 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 COL4A5P29400 1685 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 ERVV-1B6SEH8 477 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 PTK2Q05397 1052 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 PDXDC2PQ6P474 469 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 ZNF34Q8IZ26 560 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 XAGE3Q8WTP9 111 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
SH3D19-208ENST00000508492 SNED1Q8TER0 1413 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-208ENST00000508492 TLL1O43897 1013 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 NTSR2O95665 410 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 RFX1P22670 979 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 MCCD1P59942 119 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-208ENST00000508492 STYK1Q6J9G0 422 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 COPS6Q7L5N1 327 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 KCTD17Q8N5Z5 321 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 MRS2Q9HD23 443 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 BABAM1Q9NWV8 329 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 TFIP11Q9UBB9 837 aaKnown RBP10.09□□□□□ -0.79
SH3D19-208ENST00000508492 LRRC37AA6NMS7 1700 aa10.09□□□□□ -0.79
SH3D19-208ENST00000508492 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.08□□□□□ -0.8
SH3D19-208ENST00000508492 ATP9BO43861 1147 aa10.08□□□□□ -0.8
SH3D19-208ENST00000508492 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
SH3D19-208ENST00000508492 DUSP27Q5VZP5 1158 aa10.08□□□□□ -0.8
SH3D19-208ENST00000508492 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
SH3D19-208ENST00000508492 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
SH3D19-208ENST00000508492 IBTKQ9P2D0 1353 aaPredicted RBP10.08□□□□□ -0.8
SH3D19-208ENST00000508492 KLRG2A4D1S0 409 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-208ENST00000508492 NPR1P16066 1061 aa10.07□□□□□ -0.8
SH3D19-208ENST00000508492 LMNB1P20700 586 aa10.07□□□□□ -0.8
SH3D19-208ENST00000508492 GTF2E1P29083 439 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-208ENST00000508492 TSPYL6Q8N831 410 aa10.07□□□□□ -0.8
SH3D19-208ENST00000508492 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms